fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G03150.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035950 not found in 452aa AT5G03150.1 1st_1st 0.460026212 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G03150.1     MQMIPGDPFSISSSMGGFVHQETHLHHLQQQIPDLNPNSNPNPNAKPNSSSAKKKRNQPG
gm035950_Glyma1 MQMMPGDPFSLSTSIGGFTQDKQ------------NTNPNPKPNPPP-----KKKRNLPG
                ***:******:*:*:***.:::             *.*.**:**. *     ***** **

AT5G03150.1     TPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSKQEVIK
gm035950_Glyma1 TPDPDAEVIALSPKTLMATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLRQRSNKEV-R
                ******:******.********:***************************:***::** :

AT5G03150.1     KKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHAKT
gm035950_Glyma1 KKVYICPEQTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHTKT
                ******* :******.:************:***************************:**

AT5G03150.1     CGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSSLSNN------NPVISTTNLNF
gm035950_Glyma1 CGTREYKCDCGTLFSRKDSFITHRAFCDALAEEKGGNNVMNSQQHGLGGHGLIGAQSLQN
                ******************************:** .  . :..:      : :*.: .*: 

AT5G03150.1     GNESNVMNNPNLPHGFVHRGVHHPDINAAISQFGLGFGHDLSAMHAQGLSEMVQMASTGN
gm035950_Glyma1 GNHQMNSNNNNINSN-----------NNSASDAGPNY------MSSSGLPEIVQMAHA--
                **..   ** *:  .           * : *: * .:      * :.**.*:**** :  

AT5G03150.1     HHLFPSSSSSLPDFSGHHQFQIPMTSTNPSLTLSSSSTSQQTSASLQHQTLKDSSFSPLF
gm035950_Glyma1 NALMGCSSSMVSNFGGVHA-----GSNSSSANLSLGKRGEACGSTV-------VDLASIY
                : *: .*** :.:*.* *       *...* .** .. .:  .:::        .::.::

AT5G03150.1     SSSS-ENKQNKPLSPMSATALLQKAAQMGSTRSNSSTAPSFFAGPTMTSSSATASPPPRS
gm035950_Glyma1 NNSEGQNKNSKPASPMSATALLQKAAQMGSTR---STNPSIFSG----SFGVINSPSSQT
                ..*. :**:.** *******************   ** **:*:*    * ..  **..::

AT5G03150.1     SSPMMIQQQLNNFNTNVLRENHNRAPPPLSGVSTSSVDNNPFQSNRSGLNPAQQM-GLTR
gm035950_Glyma1 TS-------LNNNN------NGGAAMMLASNTSTAAANANDFSSLRHSSNSFDQLNNLTR
                :*       *** *      * . *    *..**::.: * *.* * . *. :*: .***

AT5G03150.1     DFLGVSNEHHPHQTGRRP-FLPQELARFAPLG------------
gm035950_Glyma1 DFLGVSGG---GGGGGGPQFLPQELGKFASMGSPMGLSQFTSNQ
                ******.       *  * ******.:**.:*
BoxShade v3.31 C (beta, 970507) Output
AT5G03150.1     M Q M I P G D P F S I S S S M G G F V H Q E T H L H H L Q Q Q I P D L N P N S N P N P N A K P N S S S A K K K R N Q P G
gm035950_Glyma1    M Q M M P G D P F S L S T S I G G F T Q D K Q - - - - - - - - - - - - N T N P N P K P N P P P - - - - - K K K R N L P G
 
AT5G03150.1     T P D P D A D V I A L S P T T L M A T N R F V C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L K Q R S K Q E V I K
gm035950_Glyma1    T P D P D A E V I A L S P K T L M A T N R F I C E I C N K G F Q R D Q N L Q L H R R G H N L P W K L R Q R S N K E V - R
 
AT5G03150.1     K K V Y I C P I K T C V H H D A S R A L G D L T G I K K H Y S R K H G E K K W K C E K C S K K Y A V Q S D W K A H A K T
gm035950_Glyma1    K K V Y I C P E Q T C V H H D P A R A L G D L T G I K K H F S R K H G E K K W K C E K C S K K Y A V Q S D W K A H T K T
 
AT5G03150.1     C G T R E Y K C D C G T L F S R K D S F I T H R A F C D A L T E E G A R M S S L S N N - - - - - - N P V I S T T N L N F
gm035950_Glyma1    C G T R E Y K C D C G T L F S R K D S F I T H R A F C D A L A E E K G G N N V M N S Q Q H G L G G H G L I G A Q S L Q N
 
AT5G03150.1     G N E S N V M N N P N L P H G F V H R G V H H P D I N A A I S Q F G L G F G H D L S A M H A Q G L S E M V Q M A S T G N
gm035950_Glyma1    G N H Q M N S N N N N I N S N - - - - - - - - - - - N N S A S D A G P N Y - - - - - - M S S S G L P E I V Q M A H A - -
 
AT5G03150.1     H H L F P S S S S S L P D F S G H H Q F Q I P M T S T N P S L T L S S S S T S Q Q T S A S L Q H Q T L K D S S F S P L F
gm035950_Glyma1    N A L M G C S S S M V S N F G G V H A - - - - - G S N S S S A N L S L G K R G E A C G S T V - - - - - - - V D L A S I Y
 
AT5G03150.1     S S S S - E N K Q N K P L S P M S A T A L L Q K A A Q M G S T R S N S S T A P S F F A G P T M T S S S A T A S P P P R S
gm035950_Glyma1    N N S E G Q N K N S K P A S P M S A T A L L Q K A A Q M G S T R - - - S T N P S I F S G - - - - S F G V I N S P S S Q T
 
AT5G03150.1     S S P M M I Q Q Q L N N F N T N V L R E N H N R A P P P L S G V S T S S V D N N P F Q S N R S G L N P A Q Q M - G L T R
gm035950_Glyma1    T S - - - - - - - L N N N N - - - - - - N G G A A M M L A S N T S T A A A N A N D F S S L R H S S N S F D Q L N N L T R
 
AT5G03150.1     D F L G V S N E H H P H Q T G R R P - F L P Q E L A R F A P L G - - - - - - - - - - - -
gm035950_Glyma1    D F L G V S G G - - - G G G G G G P Q F L P Q E L G K F A S M G S P M G L S Q F T S N Q
 
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