fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G03415.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006716 not found in 299aa AT5G03415.1 1st_1st 0.624806201 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G03415.1     MTTTGSNSNHNHHESNNNNNNPSTRSWGTAVSGQSVSTSGSMGSPSSRSEQTITVVTSTS
pt006716_POPTR_ -----------------------------------------MATPA-------------S
                                                         *.:*:             *

AT5G03415.1     DTTFQRLNNLDIQGDDAGSQGASGVKKKKRGQRAAGPDKTGRGLRQFSMKVCEKVESKGR
pt006716_POPTR_ DSTFLRLNHLDIHADDAATQDAAANKKKKRGQRAVGADKSGRGLRQFSIKVCEKVESKGT
                *:** ***:***:.***.:*.*:. *********.*.**:********:********** 

AT5G03415.1     TTYNEVADELVAEFALPNNDGTSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQW
pt006716_POPTR_ TTYNEVADELVAEFADPSNSVSTPDQQQYDEKNIRRRVYDALNVLMALDIISKDKKEIQW
                *************** *.*. ::************************:************

AT5G03415.1     RGLPRTSLSDIEELKNERLSLRNRIEKKTAYSQELEEQYVGLQNLIQRNEHLYSSGNAPS
pt006716_POPTR_ KGLPRTSLSDIEELKVERLGLRNRIEKKAAYLQELEEQFVGLQNLIQRNEQLYSSGNAPS
                :************** ***.********:** ******:***********:*********

AT5G03415.1     GGVALPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNFVLKTMKFCDQPPQQP
pt006716_POPTR_ GGVSLPFILVQTRPHATVEVEISEDMQLVHFDFNSTPFELHDDNYVLKAMKFCERP----
                ***:****************************************:***:****::*    

AT5G03415.1     NGRNNSQLVCHNFTPENPNKGPSTGPTPQLDMYETHLQSQQHQQHSQLQIIPMPETNNVT
pt006716_POPTR_ -------------------QSDDMAPNPPADGGEGSSMSSMYQP----QILASPSTN---
                                   :. . .*.*  *  *    *. :*     **:. *.**   

AT5G03415.1     SSADTAPVK---SPSLPGIMNSSMKPEN
pt006716_POPTR_ -----TPVRHPTSPPLPGIIKARVKNEH
                     :**:   **.****::: :* *:
BoxShade v3.31 C (beta, 970507) Output
AT5G03415.1     M T T T G S N S N H N H H E S N N N N N N P S T R S W G T A V S G Q S V S T S G S M G S P S S R S E Q T I T V V T S T S
pt006716_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A T P A - - - - - - - - - - - - - S
 
AT5G03415.1     D T T F Q R L N N L D I Q G D D A G S Q G A S G V K K K K R G Q R A A G P D K T G R G L R Q F S M K V C E K V E S K G R
pt006716_POPTR_    D S T F L R L N H L D I H A D D A A T Q D A A A N K K K K R G Q R A V G A D K S G R G L R Q F S I K V C E K V E S K G T
 
AT5G03415.1     T T Y N E V A D E L V A E F A L P N N D G T S P D Q Q Q Y D E K N I R R R V Y D A L N V L M A M D I I S K D K K E I Q W
pt006716_POPTR_    T T Y N E V A D E L V A E F A D P S N S V S T P D Q Q Q Y D E K N I R R R V Y D A L N V L M A L D I I S K D K K E I Q W
 
AT5G03415.1     R G L P R T S L S D I E E L K N E R L S L R N R I E K K T A Y S Q E L E E Q Y V G L Q N L I Q R N E H L Y S S G N A P S
pt006716_POPTR_    K G L P R T S L S D I E E L K V E R L G L R N R I E K K A A Y L Q E L E E Q F V G L Q N L I Q R N E Q L Y S S G N A P S
 
AT5G03415.1     G G V A L P F I L V Q T R P H A T V E V E I S E D M Q L V H F D F N S T P F E L H D D N F V L K T M K F C D Q P P Q Q P
pt006716_POPTR_    G G V S L P F I L V Q T R P H A T V E V E I S E D M Q L V H F D F N S T P F E L H D D N Y V L K A M K F C E R P - - - -
 
AT5G03415.1     N G R N N S Q L V C H N F T P E N P N K G P S T G P T P Q L D M Y E T H L Q S Q Q H Q Q H S Q L Q I I P M P E T N N V T
pt006716_POPTR_    - - - - - - - - - - - - - - - - - - - Q S D D M A P N P P A D G G E G S S M S S M Y Q P - - - - Q I L A S P S T N - - -
 
AT5G03415.1     S S A D T A P V K - - - S P S L P G I M N S S M K P E N
pt006716_POPTR_    - - - - - T P V R H P T S P P L P G I I K A R V K N E H
 
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