fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G03415.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb002565 not found in 392aa AT5G03415.1 1st_1st 0.584496124 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G03415.1     -MTTTGSNSN----------------HNHHESNNNNNNPSTRSWGTAVSGQSVSTS-GSM
Sb002565_Sorbi1 MVSGTAHNPDGGGGAQGTQRQPPPPPHTQVGARTPLATPPPVSGGAA---HSASTSGGSA
                 :: *. *.:                *.:  :..   .*.. * *:*   :*.*** ** 

AT5G03415.1     GS-PSSRSEQ------------------TITVVTSTSDTTFQRLNNLDIQGDDAGSQGAS
Sb002565_Sorbi1 GSPPSSRSEQHAPDGAGKGPALGAAPAAAAAASTPASDSTFLRLNNLDINGDDAPSSQAP
                ** *******                  : :. *.:**:** *******:**** *. *.

AT5G03415.1     GVKKKKRGQRAAGPDKTGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFALPNN----
Sb002565_Sorbi1 TSKKKRRGTRAVGPDKGNRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFTDPNNNIEA
                  ***:** **.**** .*********************************: ***    

AT5G03415.1     -DGTSPDQQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWRGLPRTSLSDIEELKNER
Sb002565_Sorbi1 PDPDNPNAQQYDEKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSISDIEELKKEV
                 *  .*: **********************************:******:*******:* 

AT5G03415.1     LSLRNRIEKKTAYSQELEEQYVGLQNLIQRNEHLYSSGNAPSGGVALPFILVQTRPHATV
Sb002565_Sorbi1 VGLKGRIEKKSAYLQELQDQYVGLQNLIQRNEQLYGSGNTPSGGVDLPFILVQTRPHATV
                :.*:.*****:** ***::*************:**.***:***** **************

AT5G03415.1     EVEISEDMQLVHFDFNSTPFELHDDNFVLKTMKFCDQPPQQPNGRNNSQLVCHNFTPENP
Sb002565_Sorbi1 EVEISEDMQLVHFDFNSTPFELHDDSYVLKEMRFCGK--EQHEGAQES----------TS
                *************************.:*** *:**.:  :* :* ::*          ..

AT5G03415.1     NKGPSTGPTPQLDMYETHLQSQQHQQHSQLQIIPMPETNNVTSSADTAPVKSPSLPGIMN
Sb002565_Sorbi1 NGGESS------SMSNIYWQQVHHLERPNNGTVRLPS--------------SPPIPGILK
                * * *:      .* : : *. :* ::.:   : :*.              **.:***::

AT5G03415.1     SSMKPEN
Sb002565_Sorbi1 GRVKHEH
                . :* *:
BoxShade v3.31 C (beta, 970507) Output
AT5G03415.1     - M T T T G S N S N - - - - - - - - - - - - - - - - H N H H E S N N N N N N P S T R S W G T A V S G Q S V S T S - G S M
Sb002565_Sorbi1    M V S G T A H N P D G G G G A Q G T Q R Q P P P P P H T Q V G A R T P L A T P P P V S G G A A - - - H S A S T S G G S A
 
AT5G03415.1     G S - P S S R S E Q - - - - - - - - - - - - - - - - - - T I T V V T S T S D T T F Q R L N N L D I Q G D D A G S Q G A S
Sb002565_Sorbi1    G S P P S S R S E Q H A P D G A G K G P A L G A A P A A A A A A S T P A S D S T F L R L N N L D I N G D D A P S S Q A P
 
AT5G03415.1     G V K K K K R G Q R A A G P D K T G R G L R Q F S M K V C E K V E S K G R T T Y N E V A D E L V A E F A L P N N - - - -
Sb002565_Sorbi1    T S K K K R R G T R A V G P D K G N R G L R Q F S M K V C E K V E S K G R T T Y N E V A D E L V A E F T D P N N N I E A
 
AT5G03415.1     - D G T S P D Q Q Q Y D E K N I R R R V Y D A L N V L M A M D I I S K D K K E I Q W R G L P R T S L S D I E E L K N E R
Sb002565_Sorbi1    P D P D N P N A Q Q Y D E K N I R R R V Y D A L N V L M A M D I I S K D K K E I Q W K G L P R T S I S D I E E L K K E V
 
AT5G03415.1     L S L R N R I E K K T A Y S Q E L E E Q Y V G L Q N L I Q R N E H L Y S S G N A P S G G V A L P F I L V Q T R P H A T V
Sb002565_Sorbi1    V G L K G R I E K K S A Y L Q E L Q D Q Y V G L Q N L I Q R N E Q L Y G S G N T P S G G V D L P F I L V Q T R P H A T V
 
AT5G03415.1     E V E I S E D M Q L V H F D F N S T P F E L H D D N F V L K T M K F C D Q P P Q Q P N G R N N S Q L V C H N F T P E N P
Sb002565_Sorbi1    E V E I S E D M Q L V H F D F N S T P F E L H D D S Y V L K E M R F C G K - - E Q H E G A Q E S - - - - - - - - - - T S
 
AT5G03415.1     N K G P S T G P T P Q L D M Y E T H L Q S Q Q H Q Q H S Q L Q I I P M P E T N N V T S S A D T A P V K S P S L P G I M N
Sb002565_Sorbi1    N G G E S S - - - - - - S M S N I Y W Q Q V H H L E R P N N G T V R L P S - - - - - - - - - - - - - - S P P I P G I L K
 
AT5G03415.1     S S M K P E N
Sb002565_Sorbi1    G R V K H E H
 
0