Input
| Putative repression domain
|
|
AT5G03510.1 |
KKPVASLGLGLDGVYQ at 108/292 in AT5G03510.1 |
|
PKNFLQLDLNLPAPED at 249/292 in AT5G03510.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt020482 |
PKNILALDLNLPAPED in 243/283 |
AT5G03510.1 |
1st_1st |
0.370292887 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT5G03510.1 MTSVLEESGDHA---RLVLLIKGKRTKRQRSASPLMMNAAAVSSVCSGERSSVEVREEEA
pt020482_POPTR_ ----MEAQDDFVGSNDLTQIIKGKRTKRQRSSSPYMHGS------ISSPTTSSEVTER--
:* ..*.. *. :***********:** * .: *. :* ** *.
AT5G03510.1 AGEVEFQGATDEDEDMANCLILLSQGHQAKSSDDHLSMQRMGFFSNKKP-VASLGLGLDG
pt020482_POPTR_ ---------TEEEEDMANCLILLAQGDRPKQIHENKSGKVEKFRARKSSDMSTPTINKAG
*:*:**********:**.:.*. .:: * : * :.*.. ::: :. *
AT5G03510.1 --VYQCKTCDKSFHSFQALGGHRASHKKPKLGASVFKCVEKKTASASTVET------VEA
pt020482_POPTR_ FLVYECKTCNRSFPSFQALGGHRASHKRPKATAE-----EKKGLVVASMEDLGVCQLIKR
**:****::** *************:** *. *** .:::* ::
AT5G03510.1 GAVGSFLSLQVTSSDGSKK-----PEKTHECSICKAEFSSGQALGGHMRRHRGLT-----
pt020482_POPTR_ SNLDPSLSLQIGHNNNVNKGFQGNKAKTHECSICGSEFMSGQALGGHMRRHRANTGNQAG
. :.. ****: .:. :* ******** :** *************. *
AT5G03510.1 -INANATSAIKTAISSSSHHHHEESIRPKNFLQLDLNLPAPEDERCCEKPKFAFASKDQI
pt020482_POPTR_ MITTDSSSA--TAESNIHGDHHQ--IKPKNILALDLNLPAPEDDHHLRESNFQFTSTRQA
*.::::** ** *. .**: *:***:* **********:: .:.:* *:*. *
AT5G03510.1 LLFTAASNSLIDCHH
pt020482_POPTR_ LVFSA--TALVDCHY
*:*:* .:*:***:
BoxShade v3.31 C (beta, 970507) Output
AT5G03510.1 |
M |
T |
S |
V |
L |
E |
E |
S |
G |
D |
H |
A |
- |
- |
- |
R |
L |
V |
L |
L |
I |
K |
G |
K |
R |
T |
K |
R |
Q |
R |
S |
A |
S |
P |
L |
M |
M |
N |
A |
A |
A |
V |
S |
S |
V |
C |
S |
G |
E |
R |
S |
S |
V |
E |
V |
R |
E |
E |
E |
A |
pt020482_POPTR_ |
- |
- |
- |
- |
M |
E |
A |
Q |
D |
D |
F |
V |
G |
S |
N |
D |
L |
T |
Q |
I |
I |
K |
G |
K |
R |
T |
K |
R |
Q |
R |
S |
S |
S |
P |
Y |
M |
H |
G |
S |
- |
- |
- |
- |
- |
- |
I |
S |
S |
P |
T |
T |
S |
S |
E |
V |
T |
E |
R |
- |
- |
|
AT5G03510.1 |
A |
G |
E |
V |
E |
F |
Q |
G |
A |
T |
D |
E |
D |
E |
D |
M |
A |
N |
C |
L |
I |
L |
L |
S |
Q |
G |
H |
Q |
A |
K |
S |
S |
D |
D |
H |
L |
S |
M |
Q |
R |
M |
G |
F |
F |
S |
N |
K |
K |
P |
- |
V |
A |
S |
L |
G |
L |
G |
L |
D |
G |
pt020482_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
T |
E |
E |
E |
E |
D |
M |
A |
N |
C |
L |
I |
L |
L |
A |
Q |
G |
D |
R |
P |
K |
Q |
I |
H |
E |
N |
K |
S |
G |
K |
V |
E |
K |
F |
R |
A |
R |
K |
S |
S |
D |
M |
S |
T |
P |
T |
I |
N |
K |
A |
G |
|
AT5G03510.1 |
- |
- |
V |
Y |
Q |
C |
K |
T |
C |
D |
K |
S |
F |
H |
S |
F |
Q |
A |
L |
G |
G |
H |
R |
A |
S |
H |
K |
K |
P |
K |
L |
G |
A |
S |
V |
F |
K |
C |
V |
E |
K |
K |
T |
A |
S |
A |
S |
T |
V |
E |
T |
- |
- |
- |
- |
- |
- |
V |
E |
A |
pt020482_POPTR_ |
F |
L |
V |
Y |
E |
C |
K |
T |
C |
N |
R |
S |
F |
P |
S |
F |
Q |
A |
L |
G |
G |
H |
R |
A |
S |
H |
K |
R |
P |
K |
A |
T |
A |
E |
- |
- |
- |
- |
- |
E |
K |
K |
G |
L |
V |
V |
A |
S |
M |
E |
D |
L |
G |
V |
C |
Q |
L |
I |
K |
R |
|
AT5G03510.1 |
G |
A |
V |
G |
S |
F |
L |
S |
L |
Q |
V |
T |
S |
S |
D |
G |
S |
K |
K |
- |
- |
- |
- |
- |
P |
E |
K |
T |
H |
E |
C |
S |
I |
C |
K |
A |
E |
F |
S |
S |
G |
Q |
A |
L |
G |
G |
H |
M |
R |
R |
H |
R |
G |
L |
T |
- |
- |
- |
- |
- |
pt020482_POPTR_ |
S |
N |
L |
D |
P |
S |
L |
S |
L |
Q |
I |
G |
H |
N |
N |
N |
V |
N |
K |
G |
F |
Q |
G |
N |
K |
A |
K |
T |
H |
E |
C |
S |
I |
C |
G |
S |
E |
F |
M |
S |
G |
Q |
A |
L |
G |
G |
H |
M |
R |
R |
H |
R |
A |
N |
T |
G |
N |
Q |
A |
G |
|
AT5G03510.1 |
- |
I |
N |
A |
N |
A |
T |
S |
A |
I |
K |
T |
A |
I |
S |
S |
S |
S |
H |
H |
H |
H |
E |
E |
S |
I |
R |
P |
K |
N |
F |
L |
Q |
L |
D |
L |
N |
L |
P |
A |
P |
E |
D |
E |
R |
C |
C |
E |
K |
P |
K |
F |
A |
F |
A |
S |
K |
D |
Q |
I |
pt020482_POPTR_ |
M |
I |
T |
T |
D |
S |
S |
S |
A |
- |
- |
T |
A |
E |
S |
N |
I |
H |
G |
D |
H |
H |
Q |
- |
- |
I |
K |
P |
K |
N |
I |
L |
A |
L |
D |
L |
N |
L |
P |
A |
P |
E |
D |
D |
H |
H |
L |
R |
E |
S |
N |
F |
Q |
F |
T |
S |
T |
R |
Q |
A |
|
AT5G03510.1 |
L |
L |
F |
T |
A |
A |
S |
N |
S |
L |
I |
D |
C |
H |
H |
pt020482_POPTR_ |
L |
V |
F |
S |
A |
- |
- |
T |
A |
L |
V |
D |
C |
H |
Y |
|
|