fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G03510.1 KKPVASLGLGLDGVYQ at 108/292 in AT5G03510.1
PKNFLQLDLNLPAPED at 249/292 in AT5G03510.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020482 PKNILALDLNLPAPED in 243/283 AT5G03510.1 1st_1st 0.370292887 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G03510.1     MTSVLEESGDHA---RLVLLIKGKRTKRQRSASPLMMNAAAVSSVCSGERSSVEVREEEA
pt020482_POPTR_ ----MEAQDDFVGSNDLTQIIKGKRTKRQRSSSPYMHGS------ISSPTTSSEVTER--
                    :* ..*..    *. :***********:** * .:       *.  :* ** *.  

AT5G03510.1     AGEVEFQGATDEDEDMANCLILLSQGHQAKSSDDHLSMQRMGFFSNKKP-VASLGLGLDG
pt020482_POPTR_ ---------TEEEEDMANCLILLAQGDRPKQIHENKSGKVEKFRARKSSDMSTPTINKAG
                         *:*:**********:**.:.*. .:: * :   * :.*.. :::  :.  *

AT5G03510.1     --VYQCKTCDKSFHSFQALGGHRASHKKPKLGASVFKCVEKKTASASTVET------VEA
pt020482_POPTR_ FLVYECKTCNRSFPSFQALGGHRASHKRPKATAE-----EKKGLVVASMEDLGVCQLIKR
                  **:****::** *************:**  *.     ***   .:::*       :: 

AT5G03510.1     GAVGSFLSLQVTSSDGSKK-----PEKTHECSICKAEFSSGQALGGHMRRHRGLT-----
pt020482_POPTR_ SNLDPSLSLQIGHNNNVNKGFQGNKAKTHECSICGSEFMSGQALGGHMRRHRANTGNQAG
                . :.. ****:  .:. :*       ******** :** *************. *     

AT5G03510.1     -INANATSAIKTAISSSSHHHHEESIRPKNFLQLDLNLPAPEDERCCEKPKFAFASKDQI
pt020482_POPTR_ MITTDSSSA--TAESNIHGDHHQ--IKPKNILALDLNLPAPEDDHHLRESNFQFTSTRQA
                 *.::::**  ** *.   .**:  *:***:* **********::  .:.:* *:*. * 

AT5G03510.1     LLFTAASNSLIDCHH
pt020482_POPTR_ LVFSA--TALVDCHY
                *:*:*  .:*:***:
BoxShade v3.31 C (beta, 970507) Output
AT5G03510.1     M T S V L E E S G D H A - - - R L V L L I K G K R T K R Q R S A S P L M M N A A A V S S V C S G E R S S V E V R E E E A
pt020482_POPTR_    - - - - M E A Q D D F V G S N D L T Q I I K G K R T K R Q R S S S P Y M H G S - - - - - - I S S P T T S S E V T E R - -
 
AT5G03510.1     A G E V E F Q G A T D E D E D M A N C L I L L S Q G H Q A K S S D D H L S M Q R M G F F S N K K P - V A S L G L G L D G
pt020482_POPTR_    - - - - - - - - - T E E E E D M A N C L I L L A Q G D R P K Q I H E N K S G K V E K F R A R K S S D M S T P T I N K A G
 
AT5G03510.1     - - V Y Q C K T C D K S F H S F Q A L G G H R A S H K K P K L G A S V F K C V E K K T A S A S T V E T - - - - - - V E A
pt020482_POPTR_    F L V Y E C K T C N R S F P S F Q A L G G H R A S H K R P K A T A E - - - - - E K K G L V V A S M E D L G V C Q L I K R
 
AT5G03510.1     G A V G S F L S L Q V T S S D G S K K - - - - - P E K T H E C S I C K A E F S S G Q A L G G H M R R H R G L T - - - - -
pt020482_POPTR_    S N L D P S L S L Q I G H N N N V N K G F Q G N K A K T H E C S I C G S E F M S G Q A L G G H M R R H R A N T G N Q A G
 
AT5G03510.1     - I N A N A T S A I K T A I S S S S H H H H E E S I R P K N F L Q L D L N L P A P E D E R C C E K P K F A F A S K D Q I
pt020482_POPTR_    M I T T D S S S A - - T A E S N I H G D H H Q - - I K P K N I L A L D L N L P A P E D D H H L R E S N F Q F T S T R Q A
 
AT5G03510.1     L L F T A A S N S L I D C H H
pt020482_POPTR_    L V F S A - - T A L V D C H Y
 
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