fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G03740.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052593 not found in 293aa AT5G03740.1 1st_1st 0.313672922 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G03740.1     MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNV-TEPIQLYVTVGSDKLLIGTLS
gm052593_Glyma1 MEFWGVEVKNGESLKVDPGDDKIIHLSNACMGDVTKDIGGGPVALYVKFGNQKFVLGTLS
                ***********:.*::*** *:::*:*:..:*: .:::   *: ***..*.:*:::****

AT5G03740.1     HEKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKV----DASDPEPEDLIDDQLEAAGFK
gm052593_Glyma1 SDKFPQISYDLVFEKEFELSHNWKYGSVFFTGFKAQPQSESDDDEDSDDIDEDIPVSAVN
                 :****:* ::*:*::* ***.** *****:*:*.    ::.* * .* **::: .:..:

AT5G03740.1     AAPKSAAKQVNFQLPNEDVKAKQDDDADGSEEDSS--DDDDSENSGDEE--EEKVTAESD
gm052593_Glyma1 GKPEVGVK------PDAN-EAKQKKIADPRKRDANGEDDDSSESDSDDDSSEDKPTANGD
                . *: ..*      *: : :***.. **  :.*:.  ***.**...*::  *:* **:.*

AT5G03740.1     SE----EDDSSDDEE---DDSSEEETPKKPEEPKKRSAEPNSSKNPASNKKAKFVTPQKT
gm052593_Glyma1 IESSEGDDDSDDDEEEEGDDESDEETAKKIEASNKRGIE-SSKKTPVPVKKTKFVTPQKT
                 *    :***.****   **.*:***.** * .:**. * .*.*.*.. **:********

AT5G03740.1     DSKKPHVHVATPHPSKQAGKNSGGGSTGETSKQQQTPKSAGAFGCKSCTRTFTSEMGLQS
gm052593_Glyma1 DSKNV-VHAATPHPSKQAGKATA-------NNKLQSPKSGGDYSCKPCNRLFKTEDALSS
                ***:  **.*********** :.       .:: *:***.* :.**.*.* *.:* .*.*

AT5G03740.1     HTKAKHSAAA
gm052593_Glyma1 HNKAKHSAK-
                *.******
BoxShade v3.31 C (beta, 970507) Output
AT5G03740.1     M E F W G V E V K N G K P L H L D P G L D R L V H I S Q V A L G E S K N N V - T E P I Q L Y V T V G S D K L L I G T L S
gm052593_Glyma1    M E F W G V E V K N G E S L K V D P G D D K I I H L S N A C M G D V T K D I G G G P V A L Y V K F G N Q K F V L G T L S
 
AT5G03740.1     H E K F P Q L S T E I V L E R N F A L S H T W K N G S V F F S G Y K V - - - - D A S D P E P E D L I D D Q L E A A G F K
gm052593_Glyma1    S D K F P Q I S Y D L V F E K E F E L S H N W K Y G S V F F T G F K A Q P Q S E S D D D E D S D D I D E D I P V S A V N
 
AT5G03740.1     A A P K S A A K Q V N F Q L P N E D V K A K Q D D D A D G S E E D S S - - D D D D S E N S G D E E - - E E K V T A E S D
gm052593_Glyma1    G K P E V G V K - - - - - - P D A N - E A K Q K K I A D P R K R D A N G E D D D S S E S D S D D D S S E D K P T A N G D
 
AT5G03740.1     S E - - - - E D D S S D D E E - - - D D S S E E E T P K K P E E P K K R S A E P N S S K N P A S N K K A K F V T P Q K T
gm052593_Glyma1    I E S S E G D D D S D D D E E E E G D D E S D E E T A K K I E A S N K R G I E - S S K K T P V P V K K T K F V T P Q K T
 
AT5G03740.1     D S K K P H V H V A T P H P S K Q A G K N S G G G S T G E T S K Q Q Q T P K S A G A F G C K S C T R T F T S E M G L Q S
gm052593_Glyma1    D S K N V - V H A A T P H P S K Q A G K A T A - - - - - - - N N K L Q S P K S G G D Y S C K P C N R L F K T E D A L S S
 
AT5G03740.1     H T K A K H S A A A
gm052593_Glyma1    H N K A K H S A K -
 
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