Input
| Putative repression domain
|
|
AT5G04340.1 |
EDEYIALCLMLLARDG at 52/238 in AT5G04340.1 |
|
SGHRGFDLNIPPIPEFS at 201/238 in AT5G04340.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm039438 |
not found in 233aa |
AT1G27730.1 |
not_not |
0.441520467 |
III |
Gm008898 |
not found in 233aa |
AT1G27730.1 |
not_not |
0.441520467 |
III |
Gm047952 |
not found in 240aa |
AT1G27730.1 |
not_not |
0.435672514 |
III |
Pt038538 |
not found in 252aa |
AT1G27730.1 |
not_not |
0.435672514 |
III |
Pt029671 |
not found in 286aa |
AT1G27730.1 |
not_not |
0.400584795 |
III |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT5G04340.1 ----------------------------------------------MALETLTSPRLSSP
gm008898_Glyma0 ----------------------------------------------MALEALQSPRTATP
pt038538_POPTR_ ----------------------------------------------MALEALNSPTTATP
gm039438_Glyma1 ----------------------------------------------MALETLNSPTTTAP
pt029671_POPTR_ MADDDDRPPPLSLSLSIPFFLSLEILFVCSSRCPLTQENSVSRIQIMALEALNSPTTAAP
gm047952_Glyma1 ----------------------------------------------MALEALNSPTTTAP
****:* ** ::*
AT5G04340.1 MPTLFQDSALGF---HGSKGKRSKRSRSEFDRQ--SLTEDEYIALCLMLLARDGDRNRDL
gm008898_Glyma0 SFSPFEETNLSYLETPWTKGKRSKRSRMEQQLQHSSCTEEEYLALCLIMLAHGGAGGV--
pt038538_POPTR_ SF-QFEESSTHCVVEPWAKRKRSKRPRLDHQ-----PTEEEYLALCLVMLARGSTNLP--
gm039438_Glyma1 SF-PFDDPTI-----PWAKRKRSKRCSRDH------PSEEEYLALCLIMLARGGTT----
pt029671_POPTR_ -F-NYEE--------TWIKRKRSKRPRSESP-----STEEEYLALCLIMLARGGS-----
gm047952_Glyma1 SF-PFDDPTI-----PWAKRKRSKR-SRDH------PSEEEYLALCLIMLARGGTTTV--
::: * ***** : :*:**:****::**:..
AT5G04340.1 DLPS------SSSSPPLLPPLPTP------IYKCSVCDKAFSSYQALGGHKASHRKSFSL
gm008898_Glyma0 --PA--------AKPAVSDNNSAPLPAAKLSYKCSVCNKAFSSYQALGGHKASHRKLGG-
pt038538_POPTR_ -IPALDGHHKKSLAP----PTASTSSEQKISYKCSVCNKEFPSYQALGGHKASHRKLAGG
gm039438_Glyma1 --------RRVSTPP----PQPTPDPSTKLSYKCSVCNKSFPSYQALGGHKASHRKLAAS
pt029671_POPTR_ --PA----------P----PQP---PTLDLSYKCTVCNKAFSSYQALGGHKASHRKSSSE
gm047952_Glyma1 ------NNRHVSPPPPQPQPQPTPDPSTKLSYKCSVCDKSFPSYQALGGHKASHRKLAGA
* . ***:**:* *.************** .
AT5G04340.1 T--QSAGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQALGGHKRCHYEGKN
gm008898_Glyma0 --------EHHSTSSAVTTSSASNGGA---RTHECSICQKTFPTGQALGGHKRCHYEG--
pt038538_POPTR_ G----EDQTTSCTTTSATTTPVSNGSG---RVHECSICHRTFPTGQALGGHKRCHYEGII
gm039438_Glyma1 G----GEDQPTTTSSAASSANTASG-G---RTHECSICHKSFPTGQALGGHKRCHYEGNS
pt029671_POPTR_ STVATAAENPSTSTTTNTTTTTTNG-----RTHECSICHKTFLTGQALGGHKRCHYEGTI
gm047952_Glyma1 A----EDQPPSTTTSSAAATSSASG-G---KAHECSICHKSFPTGQALGGHKRCHYEGNG
:::: ::: :.* : * ****:::* ***************
AT5G04340.1 GG---GVSSSVS-NSE-----DVGSTSHVSSG----HRGFDLNIPPIPEF-----SM---
gm008898_Glyma0 -G-----NSAVT-ASE-----GVGSTHTGS------HRDFDLNLPAFPDF-----STRFF
pt038538_POPTR_ GG---AEKSGVTSTSE-----GAGSTNTRTHSHNHSHHDFDLNVPALPEF-----SSDFF
gm039438_Glyma1 NGNNNNSNSSVTAASE-----GVGSTHTVSHGH---HRDFDLNIPAFPDF-----STKV-
pt029671_POPTR_ GGNNSSSASAAITTSDGGAVGGGGVIQSKSQRSGG-GFDFDLNLPALPEFEGPRISLQAL
gm047952_Glyma1 NGNNNNSNSVVTVASE-----GVGSTHTVSHGH---HRDFDLNIPAFPDF-----STKV-
* * . *: . * : .****:*.:*:* *
AT5G04340.1 VNGDEEVMSPMPAKKLRFDFPEKP--------
gm008898_Glyma0 V--DDEVTSPHPSKKSRLNLTIPKIEIPQY--
pt038538_POPTR_ VSGDDEVMSPLPAAKRIRILMAPRIEVSQAQ-
gm039438_Glyma1 --GEDEVESPHPVMKKPRPFVIPKIEIPQYQ-
pt029671_POPTR_ C-GDQEVESPLPGKKPRLMFSLKQEKTDMGSS
gm047952_Glyma1 --GEDEVESPHPVMKKPRLFVIPKIEIPQFQ-
::** ** * * :
BoxShade v3.31 C (beta, 970507) Output
AT5G04340.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
A |
L |
E |
T |
L |
T |
S |
P |
R |
L |
S |
S |
P |
gm008898_Glyma0 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
A |
L |
E |
A |
L |
Q |
S |
P |
R |
T |
A |
T |
P |
pt038538_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
A |
L |
E |
A |
L |
N |
S |
P |
T |
T |
A |
T |
P |
gm039438_Glyma1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
A |
L |
E |
T |
L |
N |
S |
P |
T |
T |
T |
A |
P |
pt029671_POPTR_ |
M |
A |
D |
D |
D |
D |
R |
P |
P |
P |
L |
S |
L |
S |
L |
S |
I |
P |
F |
F |
L |
S |
L |
E |
I |
L |
F |
V |
C |
S |
S |
R |
C |
P |
L |
T |
Q |
E |
N |
S |
V |
S |
R |
I |
Q |
I |
M |
A |
L |
E |
A |
L |
N |
S |
P |
T |
T |
A |
A |
P |
gm047952_Glyma1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
A |
L |
E |
A |
L |
N |
S |
P |
T |
T |
T |
A |
P |
|
AT5G04340.1 |
M |
P |
T |
L |
F |
Q |
D |
S |
A |
L |
G |
F |
- |
- |
- |
H |
G |
S |
K |
G |
K |
R |
S |
K |
R |
S |
R |
S |
E |
F |
D |
R |
Q |
- |
- |
S |
L |
T |
E |
D |
E |
Y |
I |
A |
L |
C |
L |
M |
L |
L |
A |
R |
D |
G |
D |
R |
N |
R |
D |
L |
gm008898_Glyma0 |
S |
F |
S |
P |
F |
E |
E |
T |
N |
L |
S |
Y |
L |
E |
T |
P |
W |
T |
K |
G |
K |
R |
S |
K |
R |
S |
R |
M |
E |
Q |
Q |
L |
Q |
H |
S |
S |
C |
T |
E |
E |
E |
Y |
L |
A |
L |
C |
L |
I |
M |
L |
A |
H |
G |
G |
A |
G |
G |
V |
- |
- |
pt038538_POPTR_ |
S |
F |
- |
Q |
F |
E |
E |
S |
S |
T |
H |
C |
V |
V |
E |
P |
W |
A |
K |
R |
K |
R |
S |
K |
R |
P |
R |
L |
D |
H |
Q |
- |
- |
- |
- |
- |
P |
T |
E |
E |
E |
Y |
L |
A |
L |
C |
L |
V |
M |
L |
A |
R |
G |
S |
T |
N |
L |
P |
- |
- |
gm039438_Glyma1 |
S |
F |
- |
P |
F |
D |
D |
P |
T |
I |
- |
- |
- |
- |
- |
P |
W |
A |
K |
R |
K |
R |
S |
K |
R |
C |
S |
R |
D |
H |
- |
- |
- |
- |
- |
- |
P |
S |
E |
E |
E |
Y |
L |
A |
L |
C |
L |
I |
M |
L |
A |
R |
G |
G |
T |
T |
- |
- |
- |
- |
pt029671_POPTR_ |
- |
F |
- |
N |
Y |
E |
E |
- |
- |
- |
- |
- |
- |
- |
- |
T |
W |
I |
K |
R |
K |
R |
S |
K |
R |
P |
R |
S |
E |
S |
P |
- |
- |
- |
- |
- |
S |
T |
E |
E |
E |
Y |
L |
A |
L |
C |
L |
I |
M |
L |
A |
R |
G |
G |
S |
- |
- |
- |
- |
- |
gm047952_Glyma1 |
S |
F |
- |
P |
F |
D |
D |
P |
T |
I |
- |
- |
- |
- |
- |
P |
W |
A |
K |
R |
K |
R |
S |
K |
R |
- |
S |
R |
D |
H |
- |
- |
- |
- |
- |
- |
P |
S |
E |
E |
E |
Y |
L |
A |
L |
C |
L |
I |
M |
L |
A |
R |
G |
G |
T |
T |
T |
V |
- |
- |
|
AT5G04340.1 |
D |
L |
P |
S |
- |
- |
- |
- |
- |
- |
S |
S |
S |
S |
P |
P |
L |
L |
P |
P |
L |
P |
T |
P |
- |
- |
- |
- |
- |
- |
I |
Y |
K |
C |
S |
V |
C |
D |
K |
A |
F |
S |
S |
Y |
Q |
A |
L |
G |
G |
H |
K |
A |
S |
H |
R |
K |
S |
F |
S |
L |
gm008898_Glyma0 |
- |
- |
P |
A |
- |
- |
- |
- |
- |
- |
- |
- |
A |
K |
P |
A |
V |
S |
D |
N |
N |
S |
A |
P |
L |
P |
A |
A |
K |
L |
S |
Y |
K |
C |
S |
V |
C |
N |
K |
A |
F |
S |
S |
Y |
Q |
A |
L |
G |
G |
H |
K |
A |
S |
H |
R |
K |
L |
G |
G |
- |
pt038538_POPTR_ |
- |
I |
P |
A |
L |
D |
G |
H |
H |
K |
K |
S |
L |
A |
P |
- |
- |
- |
- |
P |
T |
A |
S |
T |
S |
S |
E |
Q |
K |
I |
S |
Y |
K |
C |
S |
V |
C |
N |
K |
E |
F |
P |
S |
Y |
Q |
A |
L |
G |
G |
H |
K |
A |
S |
H |
R |
K |
L |
A |
G |
G |
gm039438_Glyma1 |
- |
- |
- |
- |
- |
- |
- |
- |
R |
R |
V |
S |
T |
P |
P |
- |
- |
- |
- |
P |
Q |
P |
T |
P |
D |
P |
S |
T |
K |
L |
S |
Y |
K |
C |
S |
V |
C |
N |
K |
S |
F |
P |
S |
Y |
Q |
A |
L |
G |
G |
H |
K |
A |
S |
H |
R |
K |
L |
A |
A |
S |
pt029671_POPTR_ |
- |
- |
P |
A |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
- |
- |
- |
- |
P |
Q |
P |
- |
- |
- |
P |
T |
L |
D |
L |
S |
Y |
K |
C |
T |
V |
C |
N |
K |
A |
F |
S |
S |
Y |
Q |
A |
L |
G |
G |
H |
K |
A |
S |
H |
R |
K |
S |
S |
S |
E |
gm047952_Glyma1 |
- |
- |
- |
- |
- |
- |
N |
N |
R |
H |
V |
S |
P |
P |
P |
P |
Q |
P |
Q |
P |
Q |
P |
T |
P |
D |
P |
S |
T |
K |
L |
S |
Y |
K |
C |
S |
V |
C |
D |
K |
S |
F |
P |
S |
Y |
Q |
A |
L |
G |
G |
H |
K |
A |
S |
H |
R |
K |
L |
A |
G |
A |
|
AT5G04340.1 |
T |
- |
- |
Q |
S |
A |
G |
G |
D |
E |
L |
S |
T |
S |
S |
A |
I |
T |
T |
S |
G |
I |
S |
G |
G |
G |
G |
G |
S |
V |
K |
S |
H |
V |
C |
S |
I |
C |
H |
K |
S |
F |
A |
T |
G |
Q |
A |
L |
G |
G |
H |
K |
R |
C |
H |
Y |
E |
G |
K |
N |
gm008898_Glyma0 |
- |
- |
- |
- |
- |
- |
- |
- |
E |
H |
H |
S |
T |
S |
S |
A |
V |
T |
T |
S |
S |
A |
S |
N |
G |
G |
A |
- |
- |
- |
R |
T |
H |
E |
C |
S |
I |
C |
Q |
K |
T |
F |
P |
T |
G |
Q |
A |
L |
G |
G |
H |
K |
R |
C |
H |
Y |
E |
G |
- |
- |
pt038538_POPTR_ |
G |
- |
- |
- |
- |
E |
D |
Q |
T |
T |
S |
C |
T |
T |
T |
S |
A |
T |
T |
T |
P |
V |
S |
N |
G |
S |
G |
- |
- |
- |
R |
V |
H |
E |
C |
S |
I |
C |
H |
R |
T |
F |
P |
T |
G |
Q |
A |
L |
G |
G |
H |
K |
R |
C |
H |
Y |
E |
G |
I |
I |
gm039438_Glyma1 |
G |
- |
- |
- |
- |
G |
E |
D |
Q |
P |
T |
T |
T |
S |
S |
A |
A |
S |
S |
A |
N |
T |
A |
S |
G |
- |
G |
- |
- |
- |
R |
T |
H |
E |
C |
S |
I |
C |
H |
K |
S |
F |
P |
T |
G |
Q |
A |
L |
G |
G |
H |
K |
R |
C |
H |
Y |
E |
G |
N |
S |
pt029671_POPTR_ |
S |
T |
V |
A |
T |
A |
A |
E |
N |
P |
S |
T |
S |
T |
T |
T |
N |
T |
T |
T |
T |
T |
T |
N |
G |
- |
- |
- |
- |
- |
R |
T |
H |
E |
C |
S |
I |
C |
H |
K |
T |
F |
L |
T |
G |
Q |
A |
L |
G |
G |
H |
K |
R |
C |
H |
Y |
E |
G |
T |
I |
gm047952_Glyma1 |
A |
- |
- |
- |
- |
E |
D |
Q |
P |
P |
S |
T |
T |
T |
S |
S |
A |
A |
A |
T |
S |
S |
A |
S |
G |
- |
G |
- |
- |
- |
K |
A |
H |
E |
C |
S |
I |
C |
H |
K |
S |
F |
P |
T |
G |
Q |
A |
L |
G |
G |
H |
K |
R |
C |
H |
Y |
E |
G |
N |
G |
|
AT5G04340.1 |
G |
G |
- |
- |
- |
G |
V |
S |
S |
S |
V |
S |
- |
N |
S |
E |
- |
- |
- |
- |
- |
D |
V |
G |
S |
T |
S |
H |
V |
S |
S |
G |
- |
- |
- |
- |
H |
R |
G |
F |
D |
L |
N |
I |
P |
P |
I |
P |
E |
F |
- |
- |
- |
- |
- |
S |
M |
- |
- |
- |
gm008898_Glyma0 |
- |
G |
- |
- |
- |
- |
- |
N |
S |
A |
V |
T |
- |
A |
S |
E |
- |
- |
- |
- |
- |
G |
V |
G |
S |
T |
H |
T |
G |
S |
- |
- |
- |
- |
- |
- |
H |
R |
D |
F |
D |
L |
N |
L |
P |
A |
F |
P |
D |
F |
- |
- |
- |
- |
- |
S |
T |
R |
F |
F |
pt038538_POPTR_ |
G |
G |
- |
- |
- |
A |
E |
K |
S |
G |
V |
T |
S |
T |
S |
E |
- |
- |
- |
- |
- |
G |
A |
G |
S |
T |
N |
T |
R |
T |
H |
S |
H |
N |
H |
S |
H |
H |
D |
F |
D |
L |
N |
V |
P |
A |
L |
P |
E |
F |
- |
- |
- |
- |
- |
S |
S |
D |
F |
F |
gm039438_Glyma1 |
N |
G |
N |
N |
N |
N |
S |
N |
S |
S |
V |
T |
A |
A |
S |
E |
- |
- |
- |
- |
- |
G |
V |
G |
S |
T |
H |
T |
V |
S |
H |
G |
H |
- |
- |
- |
H |
R |
D |
F |
D |
L |
N |
I |
P |
A |
F |
P |
D |
F |
- |
- |
- |
- |
- |
S |
T |
K |
V |
- |
pt029671_POPTR_ |
G |
G |
N |
N |
S |
S |
S |
A |
S |
A |
A |
I |
T |
T |
S |
D |
G |
G |
A |
V |
G |
G |
G |
G |
V |
I |
Q |
S |
K |
S |
Q |
R |
S |
G |
G |
- |
G |
F |
D |
F |
D |
L |
N |
L |
P |
A |
L |
P |
E |
F |
E |
G |
P |
R |
I |
S |
L |
Q |
A |
L |
gm047952_Glyma1 |
N |
G |
N |
N |
N |
N |
S |
N |
S |
V |
V |
T |
V |
A |
S |
E |
- |
- |
- |
- |
- |
G |
V |
G |
S |
T |
H |
T |
V |
S |
H |
G |
H |
- |
- |
- |
H |
R |
D |
F |
D |
L |
N |
I |
P |
A |
F |
P |
D |
F |
- |
- |
- |
- |
- |
S |
T |
K |
V |
- |
|
AT5G04340.1 |
V |
N |
G |
D |
E |
E |
V |
M |
S |
P |
M |
P |
A |
K |
K |
L |
R |
F |
D |
F |
P |
E |
K |
P |
- |
- |
- |
- |
- |
- |
- |
- |
gm008898_Glyma0 |
V |
- |
- |
D |
D |
E |
V |
T |
S |
P |
H |
P |
S |
K |
K |
S |
R |
L |
N |
L |
T |
I |
P |
K |
I |
E |
I |
P |
Q |
Y |
- |
- |
pt038538_POPTR_ |
V |
S |
G |
D |
D |
E |
V |
M |
S |
P |
L |
P |
A |
A |
K |
R |
I |
R |
I |
L |
M |
A |
P |
R |
I |
E |
V |
S |
Q |
A |
Q |
- |
gm039438_Glyma1 |
- |
- |
G |
E |
D |
E |
V |
E |
S |
P |
H |
P |
V |
M |
K |
K |
P |
R |
P |
F |
V |
I |
P |
K |
I |
E |
I |
P |
Q |
Y |
Q |
- |
pt029671_POPTR_ |
C |
- |
G |
D |
Q |
E |
V |
E |
S |
P |
L |
P |
G |
K |
K |
P |
R |
L |
M |
F |
S |
L |
K |
Q |
E |
K |
T |
D |
M |
G |
S |
S |
gm047952_Glyma1 |
- |
- |
G |
E |
D |
E |
V |
E |
S |
P |
H |
P |
V |
M |
K |
K |
P |
R |
L |
F |
V |
I |
P |
K |
I |
E |
I |
P |
Q |
F |
Q |
- |
|
|