fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04340.1 EDEYIALCLMLLARDG at 52/238 in AT5G04340.1
SGHRGFDLNIPPIPEFS at 201/238 in AT5G04340.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039438 not found in 233aa AT1G27730.1 not_not 0.441520467 III
Gm008898 not found in 233aa AT1G27730.1 not_not 0.441520467 III
Gm047952 not found in 240aa AT1G27730.1 not_not 0.435672514 III
Pt038538 not found in 252aa AT1G27730.1 not_not 0.435672514 III
Pt029671 not found in 286aa AT1G27730.1 not_not 0.400584795 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G04340.1     ----------------------------------------------MALETLTSPRLSSP
gm008898_Glyma0 ----------------------------------------------MALEALQSPRTATP
pt038538_POPTR_ ----------------------------------------------MALEALNSPTTATP
gm039438_Glyma1 ----------------------------------------------MALETLNSPTTTAP
pt029671_POPTR_ MADDDDRPPPLSLSLSIPFFLSLEILFVCSSRCPLTQENSVSRIQIMALEALNSPTTAAP
gm047952_Glyma1 ----------------------------------------------MALEALNSPTTTAP
                                                              ****:* **  ::*

AT5G04340.1     MPTLFQDSALGF---HGSKGKRSKRSRSEFDRQ--SLTEDEYIALCLMLLARDGDRNRDL
gm008898_Glyma0 SFSPFEETNLSYLETPWTKGKRSKRSRMEQQLQHSSCTEEEYLALCLIMLAHGGAGGV--
pt038538_POPTR_ SF-QFEESSTHCVVEPWAKRKRSKRPRLDHQ-----PTEEEYLALCLVMLARGSTNLP--
gm039438_Glyma1 SF-PFDDPTI-----PWAKRKRSKRCSRDH------PSEEEYLALCLIMLARGGTT----
pt029671_POPTR_ -F-NYEE--------TWIKRKRSKRPRSESP-----STEEEYLALCLIMLARGGS-----
gm047952_Glyma1 SF-PFDDPTI-----PWAKRKRSKR-SRDH------PSEEEYLALCLIMLARGGTTTV--
                    :::           * *****   :        :*:**:****::**:..      

AT5G04340.1     DLPS------SSSSPPLLPPLPTP------IYKCSVCDKAFSSYQALGGHKASHRKSFSL
gm008898_Glyma0 --PA--------AKPAVSDNNSAPLPAAKLSYKCSVCNKAFSSYQALGGHKASHRKLGG-
pt038538_POPTR_ -IPALDGHHKKSLAP----PTASTSSEQKISYKCSVCNKEFPSYQALGGHKASHRKLAGG
gm039438_Glyma1 --------RRVSTPP----PQPTPDPSTKLSYKCSVCNKSFPSYQALGGHKASHRKLAAS
pt029671_POPTR_ --PA----------P----PQP---PTLDLSYKCTVCNKAFSSYQALGGHKASHRKSSSE
gm047952_Glyma1 ------NNRHVSPPPPQPQPQPTPDPSTKLSYKCSVCDKSFPSYQALGGHKASHRKLAGA
                              *      .         ***:**:* *.**************  . 

AT5G04340.1     T--QSAGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQALGGHKRCHYEGKN
gm008898_Glyma0 --------EHHSTSSAVTTSSASNGGA---RTHECSICQKTFPTGQALGGHKRCHYEG--
pt038538_POPTR_ G----EDQTTSCTTTSATTTPVSNGSG---RVHECSICHRTFPTGQALGGHKRCHYEGII
gm039438_Glyma1 G----GEDQPTTTSSAASSANTASG-G---RTHECSICHKSFPTGQALGGHKRCHYEGNS
pt029671_POPTR_ STVATAAENPSTSTTTNTTTTTTNG-----RTHECSICHKTFLTGQALGGHKRCHYEGTI
gm047952_Glyma1 A----EDQPPSTTTSSAAATSSASG-G---KAHECSICHKSFPTGQALGGHKRCHYEGNG
                            :::: :::  :.*     : * ****:::* ***************  

AT5G04340.1     GG---GVSSSVS-NSE-----DVGSTSHVSSG----HRGFDLNIPPIPEF-----SM---
gm008898_Glyma0 -G-----NSAVT-ASE-----GVGSTHTGS------HRDFDLNLPAFPDF-----STRFF
pt038538_POPTR_ GG---AEKSGVTSTSE-----GAGSTNTRTHSHNHSHHDFDLNVPALPEF-----SSDFF
gm039438_Glyma1 NGNNNNSNSSVTAASE-----GVGSTHTVSHGH---HRDFDLNIPAFPDF-----STKV-
pt029671_POPTR_ GGNNSSSASAAITTSDGGAVGGGGVIQSKSQRSGG-GFDFDLNLPALPEFEGPRISLQAL
gm047952_Glyma1 NGNNNNSNSVVTVASE-----GVGSTHTVSHGH---HRDFDLNIPAFPDF-----STKV-
                 *      * .   *:     . *     :        .****:*.:*:*     *    

AT5G04340.1     VNGDEEVMSPMPAKKLRFDFPEKP--------
gm008898_Glyma0 V--DDEVTSPHPSKKSRLNLTIPKIEIPQY--
pt038538_POPTR_ VSGDDEVMSPLPAAKRIRILMAPRIEVSQAQ-
gm039438_Glyma1 --GEDEVESPHPVMKKPRPFVIPKIEIPQYQ-
pt029671_POPTR_ C-GDQEVESPLPGKKPRLMFSLKQEKTDMGSS
gm047952_Glyma1 --GEDEVESPHPVMKKPRLFVIPKIEIPQFQ-
                   ::** ** *  *    :
BoxShade v3.31 C (beta, 970507) Output
AT5G04340.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E T L T S P R L S S P
gm008898_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L Q S P R T A T P
pt038538_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L N S P T T A T P
gm039438_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E T L N S P T T T A P
pt029671_POPTR_    M A D D D D R P P P L S L S L S I P F F L S L E I L F V C S S R C P L T Q E N S V S R I Q I M A L E A L N S P T T A A P
gm047952_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L N S P T T T A P
 
AT5G04340.1     M P T L F Q D S A L G F - - - H G S K G K R S K R S R S E F D R Q - - S L T E D E Y I A L C L M L L A R D G D R N R D L
gm008898_Glyma0    S F S P F E E T N L S Y L E T P W T K G K R S K R S R M E Q Q L Q H S S C T E E E Y L A L C L I M L A H G G A G G V - -
pt038538_POPTR_    S F - Q F E E S S T H C V V E P W A K R K R S K R P R L D H Q - - - - - P T E E E Y L A L C L V M L A R G S T N L P - -
gm039438_Glyma1    S F - P F D D P T I - - - - - P W A K R K R S K R C S R D H - - - - - - P S E E E Y L A L C L I M L A R G G T T - - - -
pt029671_POPTR_    - F - N Y E E - - - - - - - - T W I K R K R S K R P R S E S P - - - - - S T E E E Y L A L C L I M L A R G G S - - - - -
gm047952_Glyma1    S F - P F D D P T I - - - - - P W A K R K R S K R - S R D H - - - - - - P S E E E Y L A L C L I M L A R G G T T T V - -
 
AT5G04340.1     D L P S - - - - - - S S S S P P L L P P L P T P - - - - - - I Y K C S V C D K A F S S Y Q A L G G H K A S H R K S F S L
gm008898_Glyma0    - - P A - - - - - - - - A K P A V S D N N S A P L P A A K L S Y K C S V C N K A F S S Y Q A L G G H K A S H R K L G G -
pt038538_POPTR_    - I P A L D G H H K K S L A P - - - - P T A S T S S E Q K I S Y K C S V C N K E F P S Y Q A L G G H K A S H R K L A G G
gm039438_Glyma1    - - - - - - - - R R V S T P P - - - - P Q P T P D P S T K L S Y K C S V C N K S F P S Y Q A L G G H K A S H R K L A A S
pt029671_POPTR_    - - P A - - - - - - - - - - P - - - - P Q P - - - P T L D L S Y K C T V C N K A F S S Y Q A L G G H K A S H R K S S S E
gm047952_Glyma1    - - - - - - N N R H V S P P P P Q P Q P Q P T P D P S T K L S Y K C S V C D K S F P S Y Q A L G G H K A S H R K L A G A
 
AT5G04340.1     T - - Q S A G G D E L S T S S A I T T S G I S G G G G G S V K S H V C S I C H K S F A T G Q A L G G H K R C H Y E G K N
gm008898_Glyma0    - - - - - - - - E H H S T S S A V T T S S A S N G G A - - - R T H E C S I C Q K T F P T G Q A L G G H K R C H Y E G - -
pt038538_POPTR_    G - - - - E D Q T T S C T T T S A T T T P V S N G S G - - - R V H E C S I C H R T F P T G Q A L G G H K R C H Y E G I I
gm039438_Glyma1    G - - - - G E D Q P T T T S S A A S S A N T A S G - G - - - R T H E C S I C H K S F P T G Q A L G G H K R C H Y E G N S
pt029671_POPTR_    S T V A T A A E N P S T S T T T N T T T T T T N G - - - - - R T H E C S I C H K T F L T G Q A L G G H K R C H Y E G T I
gm047952_Glyma1    A - - - - E D Q P P S T T T S S A A A T S S A S G - G - - - K A H E C S I C H K S F P T G Q A L G G H K R C H Y E G N G
 
AT5G04340.1     G G - - - G V S S S V S - N S E - - - - - D V G S T S H V S S G - - - - H R G F D L N I P P I P E F - - - - - S M - - -
gm008898_Glyma0    - G - - - - - N S A V T - A S E - - - - - G V G S T H T G S - - - - - - H R D F D L N L P A F P D F - - - - - S T R F F
pt038538_POPTR_    G G - - - A E K S G V T S T S E - - - - - G A G S T N T R T H S H N H S H H D F D L N V P A L P E F - - - - - S S D F F
gm039438_Glyma1    N G N N N N S N S S V T A A S E - - - - - G V G S T H T V S H G H - - - H R D F D L N I P A F P D F - - - - - S T K V -
pt029671_POPTR_    G G N N S S S A S A A I T T S D G G A V G G G G V I Q S K S Q R S G G - G F D F D L N L P A L P E F E G P R I S L Q A L
gm047952_Glyma1    N G N N N N S N S V V T V A S E - - - - - G V G S T H T V S H G H - - - H R D F D L N I P A F P D F - - - - - S T K V -
 
AT5G04340.1     V N G D E E V M S P M P A K K L R F D F P E K P - - - - - - - -
gm008898_Glyma0    V - - D D E V T S P H P S K K S R L N L T I P K I E I P Q Y - -
pt038538_POPTR_    V S G D D E V M S P L P A A K R I R I L M A P R I E V S Q A Q -
gm039438_Glyma1    - - G E D E V E S P H P V M K K P R P F V I P K I E I P Q Y Q -
pt029671_POPTR_    C - G D Q E V E S P L P G K K P R L M F S L K Q E K T D M G S S
gm047952_Glyma1    - - G E D E V E S P H P V M K K P R L F V I P K I E I P Q F Q -
 
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