fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04340.1 EDEYIALCLMLLARDG at 52/238 in AT5G04340.1
SGHRGFDLNIPPIPEFS at 201/238 in AT5G04340.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021313 not found in 256aa AT5G04340.1 1st_1st 0.353801169 Ib
Gm014082 not found in 233aa AT1G27730.1 1st_not 0.456140350 II
Gm039438 not found in 233aa AT1G27730.1 not_not 0.441520467 III
Gm008898 not found in 233aa AT1G27730.1 not_not 0.441520467 III
Gm047952 not found in 240aa AT1G27730.1 not_not 0.435672514 III
Pt017464 not found in 238aa AT1G27730.1 1st_not 0.438596491 II
Pt038538 not found in 252aa AT1G27730.1 not_not 0.435672514 III
Pt029671 not found in 286aa AT1G27730.1 not_not 0.400584795 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G04340.1     ----------------------------------------------MALETLTSPRLSSP
pt029671_POPTR_ MADDDDRPPPLSLSLSIPFFLSLEILFVCSSRCPLTQENSVSRIQIMALEALNSPTTAAP
pt017464_POPTR_ ----------------------------------------------MALEALNSPTTAPP
gm014082_Glyma0 ----------------------------------------------MALEALQSPTTATP
gm039438_Glyma1 ----------------------------------------------MALETLNSPTTTAP
pt038538_POPTR_ ----------------------------------------------MALEALNSPTTATP
gm047952_Glyma1 ----------------------------------------------MALEALNSPTTTAP
gm008898_Glyma0 ----------------------------------------------MALEALQSPRTATP
Sb021313_Sorbi1 -------------------------------------------------TCIRNLTTSIS
                                                                   : .   : .

AT5G04340.1     MPTLFQDSALGF---HGSKGKRSKR-SRSE--FDRQSLTEDEYIALCLMLLARDGDRNRD
pt029671_POPTR_ -F-NYEE--------TWIKRKRSKR-PR----SESPS-TEEEYLALCLIMLARGG-----
pt017464_POPTR_ SF-QFEDLSLPCAGEPWVKRKRSKR-PR----LDHQP-TEEEYLALCLVMLARG------
gm014082_Glyma0 SFSPFEETSLSYLETPWTKGKRSKR-SRTEQQLQHPSCTEEEYLALCLIMLARGGAGSVS
gm039438_Glyma1 SF-PFDDPTI-----PWAKRKRSKRCSR-----DHPS--EEEYLALCLIMLARGGTT---
pt038538_POPTR_ SF-QFEESSTHCVVEPWAKRKRSKR-PR----LDHQP-TEEEYLALCLVMLARGSTN-LP
gm047952_Glyma1 SF-PFDDPTI-----PWAKRKRSKR-SR-----DHPS--EEEYLALCLIMLARGGTTTVN
gm008898_Glyma0 SFSPFEETNLSYLETPWTKGKRSKR-SRMEQQLQHSSCTEEEYLALCLIMLAHGGAGGVP
Sb021313_Sorbi1 FF-------------SQQERRRDRSMAI----------THDDYVSLCLMALAAAGGGGQA
                                  : :*.:  .            .::*::***: **        

AT5G04340.1     ---LDLPSSSSSPPLLP-PLPTP------IYKCSVCDKAFSSYQALGGHKASHRKSF---
pt029671_POPTR_ ----------SPAP----PQP---PTLDLSYKCTVCNKAFSSYQALGGHKASHRKSS---
pt017464_POPTR_ -------HQKSLTP----STVFTSSELKNSYKCSVCNKEFPSYQALGGHKASHRK-----
gm014082_Glyma0 ----------TAKPAVSDNNSAPLSAAKLSYKCSVCNKAFSSYQALGGHKASHRK-----
gm039438_Glyma1 -------RRVSTPP----PQPTPDPSTKLSYKCSVCNKSFPSYQALGGHKASHRK-----
pt038538_POPTR_ IPALDGHHKKSLAP----PTASTSSEQKISYKCSVCNKEFPSYQALGGHKASHRK-----
gm047952_Glyma1 N------RHVSPPPPQPQPQPTPDPSTKLSYKCSVCDKSFPSYQALGGHKASHRK-----
gm008898_Glyma0 ----------AAKPAVSDNNSAPLPAAKLSYKCSVCNKAFSSYQALGGHKASHRK-----
Sb021313_Sorbi1 ---AGLTTQYALTNTAA-CWTATAQESELRFRCSVCGKAFASHQALGGHKASHRKPTPVL
                          :                   ::*:**.* *.*:************     

AT5G04340.1     ---SLTQSAGGDELSTSSAITTSGI------SGGGGGSVKSHVCSICHKSFATGQALGGH
pt029671_POPTR_ ---SESTVATAAENPSTSTTTNTT--TTTT----NG---RTHECSICHKTFLTGQALGGH
pt017464_POPTR_ -------LAGGGEDQTTSSTTTSAITATKTVSNGSG---KTHECSICHKTFPTGQALGGH
gm014082_Glyma0 -------LAGENHPTSSAVTTSSA--SN-----GGG---RTHECSICHKTFSTGQALGGH
gm039438_Glyma1 -------LAASGGEDQPTTTSSAA--SSAN-TASGG---RTHECSICHKSFPTGQALGGH
pt038538_POPTR_ -------LAGGGEDQTTSCTTTSA--TTTPVSNGSG---RVHECSICHRTFPTGQALGGH
gm047952_Glyma1 -------LAGAAEDQPPSTTTSSA--AATS-SASGG---KAHECSICHKSFPTGQALGGH
gm008898_Glyma0 -------LGGEHHSTSSAVTTSSA--SN-----GGA---RTHECSICQKTFPTGQALGGH
Sb021313_Sorbi1 QAQASSSSAGGAAASSSGITTSAGG------SSGQG---R-HRCTVCHRSFATGQALGGH
                        .       .   :.:            .   : * *::*:::* ********

AT5G04340.1     KRCHYEGKNGG----GVSSSVSNSED--VGSTSHVSSGH------RGFDLNIPPIPEFSM
pt029671_POPTR_ KRCHYEGTIGGNNSSSASAAITTSDGGAVGGGGVIQSKSQRSGGGFDFDLNLPALPEFEG
pt017464_POPTR_ KRCHYEGIIGGG---EKSGVTSTSES--AGSTNTRTHSHN------EFDLNIPALPEFSS
gm014082_Glyma0 KRCHYEG--------GNSAVT-ASEG--VGSTHT---GSH-----RDFDLNLPAFPDFSA
gm039438_Glyma1 KRCHYEGNSNGNNNNSNSSVTAASEG--VGSTHTVSHGHH-----RDFDLNIPAFPDFST
pt038538_POPTR_ KRCHYEGIIGGA---EKSGVTSTSEG--AGSTNTRTHSHNHS--HHDFDLNVPALPEFSS
gm047952_Glyma1 KRCHYEGNGNGNNNNSNSVVTVASEG--VGSTHTVSHGHH-----RDFDLNIPAFPDFST
gm008898_Glyma0 KRCHYEG--------GNSAVT-ASEG--VGSTHT---GSH-----RDFDLNLPAFPDFST
Sb021313_Sorbi1 KRCHYWD--------GLSVSLTASSA-PSGSGSTV----------KGFDLNLVPAPAATA
                ***** .          *     *.    *.                ****: . *    

AT5G04340.1     -------VNGDEEVMSPMPAKK-------LRFDFPEKP--------
pt029671_POPTR_ PRISLQALCGDQEVESPLPGKK-------PRLMFSLKQEKTDMGSS
pt017464_POPTR_ -CFSVS---GEDEVMSPLPAAKKLRISMPPRFEVSQAQ--------
gm014082_Glyma0 -RFFV-----DDEVTSPHPSKKSRFNLTIPKIEIPQY---------
gm039438_Glyma1 -KVG------EDEVESPHPVMKKPRPFVIPKIEIPQYQ--------
pt038538_POPTR_ -DFFVS---GDDEVMSPLPAAKRIRILMAPRIEVSQAQ--------
gm047952_Glyma1 -KVG------EDEVESPHPVMKKPRLFVIPKIEIPQFQ--------
gm008898_Glyma0 -RFFV-----DDEVTSPHPSKKSRLNLTIPKIEIPQY---------
Sb021313_Sorbi1 ANAATR-WREEEEVQSPLPVKK--RRLSGPSLDLSLTI--------
                          ::** ** *  *         : ..
BoxShade v3.31 C (beta, 970507) Output
AT5G04340.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E T L T S P R L S S P
pt029671_POPTR_    M A D D D D R P P P L S L S L S I P F F L S L E I L F V C S S R C P L T Q E N S V S R I Q I M A L E A L N S P T T A A P
pt017464_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L N S P T T A P P
gm014082_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L Q S P T T A T P
gm039438_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E T L N S P T T T A P
pt038538_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L N S P T T A T P
gm047952_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L N S P T T T A P
gm008898_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L Q S P R T A T P
Sb021313_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T C I R N L T T S I S
 
AT5G04340.1     M P T L F Q D S A L G F - - - H G S K G K R S K R - S R S E - - F D R Q S L T E D E Y I A L C L M L L A R D G D R N R D
pt029671_POPTR_    - F - N Y E E - - - - - - - - T W I K R K R S K R - P R - - - - S E S P S - T E E E Y L A L C L I M L A R G G - - - - -
pt017464_POPTR_    S F - Q F E D L S L P C A G E P W V K R K R S K R - P R - - - - L D H Q P - T E E E Y L A L C L V M L A R G - - - - - -
gm014082_Glyma0    S F S P F E E T S L S Y L E T P W T K G K R S K R - S R T E Q Q L Q H P S C T E E E Y L A L C L I M L A R G G A G S V S
gm039438_Glyma1    S F - P F D D P T I - - - - - P W A K R K R S K R C S R - - - - - D H P S - - E E E Y L A L C L I M L A R G G T T - - -
pt038538_POPTR_    S F - Q F E E S S T H C V V E P W A K R K R S K R - P R - - - - L D H Q P - T E E E Y L A L C L V M L A R G S T N - L P
gm047952_Glyma1    S F - P F D D P T I - - - - - P W A K R K R S K R - S R - - - - - D H P S - - E E E Y L A L C L I M L A R G G T T T V N
gm008898_Glyma0    S F S P F E E T N L S Y L E T P W T K G K R S K R - S R M E Q Q L Q H S S C T E E E Y L A L C L I M L A H G G A G G V P
Sb021313_Sorbi1    F F - - - - - - - - - - - - - S Q Q E R R R D R S M A I - - - - - - - - - - T H D D Y V S L C L M A L A A A G G G G Q A
 
AT5G04340.1     - - - L D L P S S S S S P P L L P - P L P T P - - - - - - I Y K C S V C D K A F S S Y Q A L G G H K A S H R K S F - - -
pt029671_POPTR_    - - - - - - - - - - S P A P - - - - P Q P - - - P T L D L S Y K C T V C N K A F S S Y Q A L G G H K A S H R K S S - - -
pt017464_POPTR_    - - - - - - - H Q K S L T P - - - - S T V F T S S E L K N S Y K C S V C N K E F P S Y Q A L G G H K A S H R K - - - - -
gm014082_Glyma0    - - - - - - - - - - T A K P A V S D N N S A P L S A A K L S Y K C S V C N K A F S S Y Q A L G G H K A S H R K - - - - -
gm039438_Glyma1    - - - - - - - R R V S T P P - - - - P Q P T P D P S T K L S Y K C S V C N K S F P S Y Q A L G G H K A S H R K - - - - -
pt038538_POPTR_    I P A L D G H H K K S L A P - - - - P T A S T S S E Q K I S Y K C S V C N K E F P S Y Q A L G G H K A S H R K - - - - -
gm047952_Glyma1    N - - - - - - R H V S P P P P Q P Q P Q P T P D P S T K L S Y K C S V C D K S F P S Y Q A L G G H K A S H R K - - - - -
gm008898_Glyma0    - - - - - - - - - - A A K P A V S D N N S A P L P A A K L S Y K C S V C N K A F S S Y Q A L G G H K A S H R K - - - - -
Sb021313_Sorbi1    - - - A G L T T Q Y A L T N T A A - C W T A T A Q E S E L R F R C S V C G K A F A S H Q A L G G H K A S H R K P T P V L
 
AT5G04340.1     - - - S L T Q S A G G D E L S T S S A I T T S G I - - - - - - S G G G G G S V K S H V C S I C H K S F A T G Q A L G G H
pt029671_POPTR_    - - - S E S T V A T A A E N P S T S T T T N T T - - T T T T - - - - N G - - - R T H E C S I C H K T F L T G Q A L G G H
pt017464_POPTR_    - - - - - - - L A G G G E D Q T T S S T T T S A I T A T K T V S N G S G - - - K T H E C S I C H K T F P T G Q A L G G H
gm014082_Glyma0    - - - - - - - L A G E N H P T S S A V T T S S A - - S N - - - - - G G G - - - R T H E C S I C H K T F S T G Q A L G G H
gm039438_Glyma1    - - - - - - - L A A S G G E D Q P T T T S S A A - - S S A N - T A S G G - - - R T H E C S I C H K S F P T G Q A L G G H
pt038538_POPTR_    - - - - - - - L A G G G E D Q T T S C T T T S A - - T T T P V S N G S G - - - R V H E C S I C H R T F P T G Q A L G G H
gm047952_Glyma1    - - - - - - - L A G A A E D Q P P S T T T S S A - - A A T S - S A S G G - - - K A H E C S I C H K S F P T G Q A L G G H
gm008898_Glyma0    - - - - - - - L G G E H H S T S S A V T T S S A - - S N - - - - - G G A - - - R T H E C S I C Q K T F P T G Q A L G G H
Sb021313_Sorbi1    Q A Q A S S S S A G G A A A S S S G I T T S A G G - - - - - - S S G Q G - - - R - H R C T V C H R S F A T G Q A L G G H
 
AT5G04340.1     K R C H Y E G K N G G - - - - G V S S S V S N S E D - - V G S T S H V S S G H - - - - - - R G F D L N I P P I P E F S M
pt029671_POPTR_    K R C H Y E G T I G G N N S S S A S A A I T T S D G G A V G G G G V I Q S K S Q R S G G G F D F D L N L P A L P E F E G
pt017464_POPTR_    K R C H Y E G I I G G G - - - E K S G V T S T S E S - - A G S T N T R T H S H N - - - - - - E F D L N I P A L P E F S S
gm014082_Glyma0    K R C H Y E G - - - - - - - - G N S A V T - A S E G - - V G S T H T - - - G S H - - - - - R D F D L N L P A F P D F S A
gm039438_Glyma1    K R C H Y E G N S N G N N N N S N S S V T A A S E G - - V G S T H T V S H G H H - - - - - R D F D L N I P A F P D F S T
pt038538_POPTR_    K R C H Y E G I I G G A - - - E K S G V T S T S E G - - A G S T N T R T H S H N H S - - H H D F D L N V P A L P E F S S
gm047952_Glyma1    K R C H Y E G N G N G N N N N S N S V V T V A S E G - - V G S T H T V S H G H H - - - - - R D F D L N I P A F P D F S T
gm008898_Glyma0    K R C H Y E G - - - - - - - - G N S A V T - A S E G - - V G S T H T - - - G S H - - - - - R D F D L N L P A F P D F S T
Sb021313_Sorbi1    K R C H Y W D - - - - - - - - G L S V S L T A S S A - P S G S G S T V - - - - - - - - - - K G F D L N L V P A P A A T A
 
AT5G04340.1     - - - - - - - V N G D E E V M S P M P A K K - - - - - - - L R F D F P E K P - - - - - - - -
pt029671_POPTR_    P R I S L Q A L C G D Q E V E S P L P G K K - - - - - - - P R L M F S L K Q E K T D M G S S
pt017464_POPTR_    - C F S V S - - - G E D E V M S P L P A A K K L R I S M P P R F E V S Q A Q - - - - - - - -
gm014082_Glyma0    - R F F V - - - - - D D E V T S P H P S K K S R F N L T I P K I E I P Q Y - - - - - - - - -
gm039438_Glyma1    - K V G - - - - - - E D E V E S P H P V M K K P R P F V I P K I E I P Q Y Q - - - - - - - -
pt038538_POPTR_    - D F F V S - - - G D D E V M S P L P A A K R I R I L M A P R I E V S Q A Q - - - - - - - -
gm047952_Glyma1    - K V G - - - - - - E D E V E S P H P V M K K P R L F V I P K I E I P Q F Q - - - - - - - -
gm008898_Glyma0    - R F F V - - - - - D D E V T S P H P S K K S R L N L T I P K I E I P Q Y - - - - - - - - -
Sb021313_Sorbi1    A N A A T R - W R E E E E V Q S P L P V K K - - R R L S G P S L D L S L T I - - - - - - - -
 
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