fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04340.1 EDEYIALCLMLLARDG at 52/238 in AT5G04340.1
SGHRGFDLNIPPIPEFS at 201/238 in AT5G04340.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017464 not found in 238aa AT1G27730.1 1st_not 0.438596491 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04340.1     MALETLTSPRLSSPMPTLFQDSALGFHGS---KGKRSKRSRSEFDRQSLTEDEYIALCLM
pt017464_POPTR_ MALEALNSPT-TAPPSFQFEDLSLPCAGEPWVKRKRSKRPR--LDHQP-TEEEYLALCLV
                ****:*.**  ::* .  *:* :*   *.   * *****.*  :*:*. **:**:****:

AT5G04340.1     LLARDGDRNRDLDLPSSSSSPPLLPPLPTPIYKCSVCDKAFSSYQALGGHKASHRKSFSL
pt017464_POPTR_ MLARGHQKSLT---PSTVFTSSEL----KNSYKCSVCNKEFPSYQALGGHKASHRK----
                :***. ::.     **:  :.. *    .  ******:* *.**************    

AT5G04340.1     TQSAGGDELSTSSAITTSGISGG---GGGSVKSHVCSICHKSFATGQALGGHKRCHYEGK
pt017464_POPTR_ --LAGGGEDQTTSSTTTSAITATKTVSNGSGKTHECSICHKTFPTGQALGGHKRCHYEGI
                   ***.* .*:*: ***.*:.    ..** *:* ******:*.*************** 

AT5G04340.1     NGGGVSSSV-SNSEDVGSTSHVSSGHRGFDLNIPPIPEFS---MVNGDEEVMSPMP-AKK
pt017464_POPTR_ IGGGEKSGVTSTSESAGSTNTRTHSHNEFDLNIPALPEFSSCFSVSGEDEVMSPLPAAKK
                 *** .*.* *.**..***.  : .*. ******.:****    *.*::*****:* ***

AT5G04340.1     LRFDFPEKP------
pt017464_POPTR_ LRISMPPRFEVSQAQ
                **:.:* :
BoxShade v3.31 C (beta, 970507) Output
AT5G04340.1     M A L E T L T S P R L S S P M P T L F Q D S A L G F H G S - - - K G K R S K R S R S E F D R Q S L T E D E Y I A L C L M
pt017464_POPTR_    M A L E A L N S P T - T A P P S F Q F E D L S L P C A G E P W V K R K R S K R P R - - L D H Q P - T E E E Y L A L C L V
 
AT5G04340.1     L L A R D G D R N R D L D L P S S S S S P P L L P P L P T P I Y K C S V C D K A F S S Y Q A L G G H K A S H R K S F S L
pt017464_POPTR_    M L A R G H Q K S L T - - - P S T V F T S S E L - - - - K N S Y K C S V C N K E F P S Y Q A L G G H K A S H R K - - - -
 
AT5G04340.1     T Q S A G G D E L S T S S A I T T S G I S G G - - - G G G S V K S H V C S I C H K S F A T G Q A L G G H K R C H Y E G K
pt017464_POPTR_    - - L A G G G E D Q T T S S T T T S A I T A T K T V S N G S G K T H E C S I C H K T F P T G Q A L G G H K R C H Y E G I
 
AT5G04340.1     N G G G V S S S V - S N S E D V G S T S H V S S G H R G F D L N I P P I P E F S - - - M V N G D E E V M S P M P - A K K
pt017464_POPTR_    I G G G E K S G V T S T S E S A G S T N T R T H S H N E F D L N I P A L P E F S S C F S V S G E D E V M S P L P A A K K
 
AT5G04340.1     L R F D F P E K P - - - - - -
pt017464_POPTR_    L R I S M P P R F E V S Q A Q
 
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