fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04340.1 EDEYIALCLMLLARDG at 52/238 in AT5G04340.1
SGHRGFDLNIPPIPEFS at 201/238 in AT5G04340.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt017464 not found in 238aa AT1G27730.1 1st_not 0.438596491 II
Pt038538 not found in 252aa AT1G27730.1 not_not 0.435672514 III
Pt029671 not found in 286aa AT1G27730.1 not_not 0.400584795 III
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G04340.1     ----------------------------------------------MALETLTSPRLSSP
pt017464_POPTR_ ----------------------------------------------MALEALNSPTTAPP
pt029671_POPTR_ MADDDDRPPPLSLSLSIPFFLSLEILFVCSSRCPLTQENSVSRIQIMALEALNSPTTAAP
pt038538_POPTR_ ----------------------------------------------MALEALNSPTTATP
                                                              ****:*.**  :.*

AT5G04340.1     MPTLFQDSALGFHGS-----KGKRSKRSRSEFDRQSLTEDEYIALCLMLLARDGDRNRDL
pt017464_POPTR_ S---FQFEDLSLPCAGEPWVKRKRSKRPRLD---HQPTEEEYLALCLVMLARG-------
pt029671_POPTR_ ----FNYE--------ETWIKRKRSKRPRSE---SPSTEEEYLALCLIMLARGGS-----
pt038538_POPTR_ S---FQFEESSTHCVVEPWAKRKRSKRPRLD---HQPTEEEYLALCLVMLARGSTN----
                    *: .            * *****.* :      **:**:****::***.       

AT5G04340.1     DLPSSS----SSPPLLPPL------PTPIYKCSVCDKAFSSYQALGGHKASHRKSFSLTQ
pt017464_POPTR_ ----------HQKSLTPSTVFTSSELKNSYKCSVCNKEFPSYQALGGHKASHRK------
pt029671_POPTR_ --PAPP---------QPPT------LDLSYKCTVCNKAFSSYQALGGHKASHRKSSSEST
pt038538_POPTR_ -LPIPALDGHHKKSLAPPTASTSSEQKISYKCSVCNKEFPSYQALGGHKASHRK------
                                *.           ***:**:* *.**************      

AT5G04340.1     SAGGDELSTSSAITTSG------ISGGGGGSVKSHVCSICHKSFATGQALGGHKRCHYEG
pt017464_POPTR_ LAGGGEDQTTSSTTTSAITATKTVSNGSG---KTHECSICHKTFPTGQALGGHKRCHYEG
pt029671_POPTR_ VATAAENPSTSTTTN----TTTTTTN--G---RTHECSICHKTFLTGQALGGHKRCHYEG
pt038538_POPTR_ LAGGGEDQTTSCTTTSA--TTTPVSNGSG---RVHECSICHRTFPTGQALGGHKRCHYEG
                 * . *  ::*  *.         :.  *   : * *****::* ***************

AT5G04340.1     KNGGGVSSSVS---NSED---------VGSTSHVSS-GHRGFDLNIPPIPEFS-------
pt017464_POPTR_ IIGGGEKSGVT---STSE-----SAGSTNTRTHSHN----EFDLNIPALPEFS----SCF
pt029671_POPTR_ TIGGNNSSSASAAITTSDGGAVGGGGVIQSKSQRSG-GGFDFDLNLPALPEFEGPRISLQ
pt038538_POPTR_ IIGGAEKSGVT---STSE-----GAGSTNTRTHSHNHSHHDFDLNVPALPEFS----SDF
                  **  .*..:   .:.:           : ::  .     ****:*.:***.       

AT5G04340.1     MVNGDEEVMSPMPAKK-------LRFDFPEKP--------
pt017464_POPTR_ SVSGEDEVMSPLPAAKKLRISMPPRFEVSQAQ--------
pt029671_POPTR_ ALCGDQEVESPLPGKK-------PRLMFSLKQEKTDMGSS
pt038538_POPTR_ FVSGDDEVMSPLPAAKRIRILMAPRIEVSQAQ--------
                 : *::** **:*. *        *: ..
BoxShade v3.31 C (beta, 970507) Output
AT5G04340.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E T L T S P R L S S P
pt017464_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L N S P T T A P P
pt029671_POPTR_    M A D D D D R P P P L S L S L S I P F F L S L E I L F V C S S R C P L T Q E N S V S R I Q I M A L E A L N S P T T A A P
pt038538_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A L E A L N S P T T A T P
 
AT5G04340.1     M P T L F Q D S A L G F H G S - - - - - K G K R S K R S R S E F D R Q S L T E D E Y I A L C L M L L A R D G D R N R D L
pt017464_POPTR_    S - - - F Q F E D L S L P C A G E P W V K R K R S K R P R L D - - - H Q P T E E E Y L A L C L V M L A R G - - - - - - -
pt029671_POPTR_    - - - - F N Y E - - - - - - - - E T W I K R K R S K R P R S E - - - S P S T E E E Y L A L C L I M L A R G G S - - - - -
pt038538_POPTR_    S - - - F Q F E E S S T H C V V E P W A K R K R S K R P R L D - - - H Q P T E E E Y L A L C L V M L A R G S T N - - - -
 
AT5G04340.1     D L P S S S - - - - S S P P L L P P L - - - - - - P T P I Y K C S V C D K A F S S Y Q A L G G H K A S H R K S F S L T Q
pt017464_POPTR_    - - - - - - - - - - H Q K S L T P S T V F T S S E L K N S Y K C S V C N K E F P S Y Q A L G G H K A S H R K - - - - - -
pt029671_POPTR_    - - P A P P - - - - - - - - - Q P P T - - - - - - L D L S Y K C T V C N K A F S S Y Q A L G G H K A S H R K S S S E S T
pt038538_POPTR_    - L P I P A L D G H H K K S L A P P T A S T S S E Q K I S Y K C S V C N K E F P S Y Q A L G G H K A S H R K - - - - - -
 
AT5G04340.1     S A G G D E L S T S S A I T T S G - - - - - - I S G G G G G S V K S H V C S I C H K S F A T G Q A L G G H K R C H Y E G
pt017464_POPTR_    L A G G G E D Q T T S S T T T S A I T A T K T V S N G S G - - - K T H E C S I C H K T F P T G Q A L G G H K R C H Y E G
pt029671_POPTR_    V A T A A E N P S T S T T T N - - - - T T T T T T N - - G - - - R T H E C S I C H K T F L T G Q A L G G H K R C H Y E G
pt038538_POPTR_    L A G G G E D Q T T S C T T T S A - - T T T P V S N G S G - - - R V H E C S I C H R T F P T G Q A L G G H K R C H Y E G
 
AT5G04340.1     K N G G G V S S S V S - - - N S E D - - - - - - - - - V G S T S H V S S - G H R G F D L N I P P I P E F S - - - - - - -
pt017464_POPTR_    I I G G G E K S G V T - - - S T S E - - - - - S A G S T N T R T H S H N - - - - E F D L N I P A L P E F S - - - - S C F
pt029671_POPTR_    T I G G N N S S S A S A A I T T S D G G A V G G G G V I Q S K S Q R S G - G G F D F D L N L P A L P E F E G P R I S L Q
pt038538_POPTR_    I I G G A E K S G V T - - - S T S E - - - - - G A G S T N T R T H S H N H S H H D F D L N V P A L P E F S - - - - S D F
 
AT5G04340.1     M V N G D E E V M S P M P A K K - - - - - - - L R F D F P E K P - - - - - - - -
pt017464_POPTR_    S V S G E D E V M S P L P A A K K L R I S M P P R F E V S Q A Q - - - - - - - -
pt029671_POPTR_    A L C G D Q E V E S P L P G K K - - - - - - - P R L M F S L K Q E K T D M G S S
pt038538_POPTR_    F V S G D D E V M S P L P A A K R I R I L M A P R I E V S Q A Q - - - - - - - -
 
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