fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04340.1 EDEYIALCLMLLARDG at 52/238 in AT5G04340.1
SGHRGFDLNIPPIPEFS at 201/238 in AT5G04340.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb021313 not found in 256aa AT5G04340.1 1st_1st 0.353801169 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04340.1     MALETLTSPRLSSPMPTLFQDSALGFHGSKGKRSKRSRSEFDRQSLTEDEYIALCLMLLA
Sb021313_Sorbi1 TCIRNLT--------------TSISFFSQQERRRDRS------MAITHDDYVSLCLMALA
                 .:..**              :::.*...: :* .**       ::*.*:*::**** **

AT5G04340.1     RDGDRNRDLDLPS-------------SSSSPPLLPPLPTPIYKCSVCDKAFSSYQALGGH
Sb021313_Sorbi1 AAGGGGQAAGLTTQYALTNTAACWTATAQESELR-------FRCSVCGKAFASHQALGGH
                  *. .:  .*.:             ::... *        ::****.***:*:******

AT5G04340.1     KASHRKSFSLTQ------SAGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQ
Sb021313_Sorbi1 KASHRKPTPVLQAQASSSSAGGAAASSSGITTSAGGSSGQG----RHRCTVCHRSFATGQ
                ******. .: *      ****   *:*.  *::* *.* *     * *::**:******

AT5G04340.1     ALGGHKRCHYEGKNGGGVSSSVSNSEDVGSTSHVSSGHRGFDLNIPPIPEFSMVNG----
Sb021313_Sorbi1 ALGGHKRCHYW--DGLSVSLTASSAPS-GSGSTV----KGFDLNLVPAPAATAANAATRW
                **********   :* .** :.*.: . ** * *    :*****: * *  : .*.    

AT5G04340.1     --DEEVMSPMPAKKLRFDFPEKP-----
Sb021313_Sorbi1 REEEEVQSPLPVKKRRLSGPSLDLSLTI
                  :*** **:*.** *:. *.
BoxShade v3.31 C (beta, 970507) Output
AT5G04340.1     M A L E T L T S P R L S S P M P T L F Q D S A L G F H G S K G K R S K R S R S E F D R Q S L T E D E Y I A L C L M L L A
Sb021313_Sorbi1    T C I R N L T - - - - - - - - - - - - - - T S I S F F S Q Q E R R R D R S - - - - - - M A I T H D D Y V S L C L M A L A
 
AT5G04340.1     R D G D R N R D L D L P S - - - - - - - - - - - - - S S S S P P L L P P L P T P I Y K C S V C D K A F S S Y Q A L G G H
Sb021313_Sorbi1    A A G G G G Q A A G L T T Q Y A L T N T A A C W T A T A Q E S E L R - - - - - - - F R C S V C G K A F A S H Q A L G G H
 
AT5G04340.1     K A S H R K S F S L T Q - - - - - - S A G G D E L S T S S A I T T S G I S G G G G G S V K S H V C S I C H K S F A T G Q
Sb021313_Sorbi1    K A S H R K P T P V L Q A Q A S S S S A G G A A A S S S G I T T S A G G S S G Q G - - - - R H R C T V C H R S F A T G Q
 
AT5G04340.1     A L G G H K R C H Y E G K N G G G V S S S V S N S E D V G S T S H V S S G H R G F D L N I P P I P E F S M V N G - - - -
Sb021313_Sorbi1    A L G G H K R C H Y W - - D G L S V S L T A S S A P S - G S G S T V - - - - K G F D L N L V P A P A A T A A N A A T R W
 
AT5G04340.1     - - D E E V M S P M P A K K L R F D F P E K P - - - - -
Sb021313_Sorbi1    R E E E E V Q S P L P V K K R R L S G P S L D L S L T I
 
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