fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04340.1 EDEYIALCLMLLARDG at 52/238 in AT5G04340.1
SGHRGFDLNIPPIPEFS at 201/238 in AT5G04340.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014082 not found in 233aa AT1G27730.1 1st_not 0.456140350 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04340.1     MALETLTSPRLSSPMPTLFQDSALGF---HGSKGKRSKRSRSEFDRQ--SLTEDEYIALC
gm014082_Glyma0 MALEALQSPTTATPSFSPFEETSLSYLETPWTKGKRSKRSRTEQQLQHPSCTEEEYLALC
                ****:* **  ::*  : *::::*.:     :*********:* : *  * **:**:***

AT5G04340.1     LMLLARDGDRNRDLDLP--SSSSSPPLLPPLPTPIYKCSVCDKAFSSYQALGGHKASHRK
gm014082_Glyma0 LIMLARGGAGSVSTAKPAVSDNNSAPLSAAKLS--YKCSVCNKAFSSYQALGGHKASHRK
                *::***.*  . .   *  *...*.** ..  :  ******:******************

AT5G04340.1     SFSLTQSAGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATGQALGGHKRCHYEG
gm014082_Glyma0 -------LAGENHPTSSAVTTSSASNGGG---RTHECSICHKTFSTGQALGGHKRCHYEG
                        .*:: .****:***. *.***   ::* ******:*:***************

AT5G04340.1     KNGGGVSSSVSNSEDVGSTSHVSSGHRGFDLNIPPIPEFS---MVNGDEEVMSPMPAKKL
gm014082_Glyma0 GN-----SAVTASEGVGST-HTGS-HRDFDLNLPAFPDFSARFFV--DDEVTSPHPSKKS
                 *     *:*: **.**** *..* **.****:*.:*:**   :*  *:** ** *:** 

AT5G04340.1     RFDFP----EKP--
gm014082_Glyma0 RFNLTIPKIEIPQY
                **::.    * *
BoxShade v3.31 C (beta, 970507) Output
AT5G04340.1     M A L E T L T S P R L S S P M P T L F Q D S A L G F - - - H G S K G K R S K R S R S E F D R Q - - S L T E D E Y I A L C
gm014082_Glyma0    M A L E A L Q S P T T A T P S F S P F E E T S L S Y L E T P W T K G K R S K R S R T E Q Q L Q H P S C T E E E Y L A L C
 
AT5G04340.1     L M L L A R D G D R N R D L D L P - - S S S S S P P L L P P L P T P I Y K C S V C D K A F S S Y Q A L G G H K A S H R K
gm014082_Glyma0    L I M L A R G G A G S V S T A K P A V S D N N S A P L S A A K L S - - Y K C S V C N K A F S S Y Q A L G G H K A S H R K
 
AT5G04340.1     S F S L T Q S A G G D E L S T S S A I T T S G I S G G G G G S V K S H V C S I C H K S F A T G Q A L G G H K R C H Y E G
gm014082_Glyma0    - - - - - - - L A G E N H P T S S A V T T S S A S N G G G - - - R T H E C S I C H K T F S T G Q A L G G H K R C H Y E G
 
AT5G04340.1     K N G G G V S S S V S N S E D V G S T S H V S S G H R G F D L N I P P I P E F S - - - M V N G D E E V M S P M P A K K L
gm014082_Glyma0    G N - - - - - S A V T A S E G V G S T - H T G S - H R D F D L N L P A F P D F S A R F F V - - D D E V T S P H P S K K S
 
AT5G04340.1     R F D F P - - - - E K P - -
gm014082_Glyma0    R F N L T I P K I E I P Q Y
 
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