fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04340.1 EDEYIALCLMLLARDG at 52/238 in AT5G04340.1
SGHRGFDLNIPPIPEFS at 201/238 in AT5G04340.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm014082 not found in 233aa AT1G27730.1 1st_not 0.456140350 II
Gm039438 not found in 233aa AT1G27730.1 not_not 0.441520467 III
Gm008898 not found in 233aa AT1G27730.1 not_not 0.441520467 III
Gm047952 not found in 240aa AT1G27730.1 not_not 0.435672514 III
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CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G04340.1     MALETLTSPRLSSPMPTLFQDSALGF---HGSKGKRSKR-SRSE--FDRQSLTEDEYIAL
gm047952_Glyma1 MALEALNSPTTTAPSF-PFDDPTI-----PWAKRKRSKR-SR-----DHPS--EEEYLAL
gm039438_Glyma1 MALETLNSPTTTAPSF-PFDDPTI-----PWAKRKRSKRCSR-----DHPS--EEEYLAL
gm014082_Glyma0 MALEALQSPTTATPSFSPFEETSLSYLETPWTKGKRSKR-SRTEQQLQHPSCTEEEYLAL
gm008898_Glyma0 MALEALQSPRTATPSFSPFEETNLSYLETPWTKGKRSKR-SRMEQQLQHSSCTEEEYLAL
                ****:* **  ::*    *::. :       :* ***** **     :: *  *:**:**

AT5G04340.1     CLMLLARDGDRNRDLDLPSSSSSPPLLPPLPTPI------YKCSVCDKAFSSYQALGGHK
gm047952_Glyma1 CLIMLARGGTTTVNN--RHVSPPPPQPQPQPTPDPSTKLSYKCSVCDKSFPSYQALGGHK
gm039438_Glyma1 CLIMLARGGTT------RRVSTPP----PQPTPDPSTKLSYKCSVCNKSFPSYQALGGHK
gm014082_Glyma0 CLIMLARGGAGSVS------TAKPAVSDNNSAPLSAAKLSYKCSVCNKAFSSYQALGGHK
gm008898_Glyma0 CLIMLAHGGAGGVP------AAKPAVSDNNSAPLPAAKLSYKCSVCNKAFSSYQALGGHK
                **::**:.*           :. *      .:*       ******:*:*.*********

AT5G04340.1     ASHRKSFSLTQSAGGDELSTSSAITTSGISG----GGGGSVKSHVCSICHKSFATGQALG
gm047952_Glyma1 ASHRK-------LAGAAEDQPPSTTTSSAAATSSASGG---KAHECSICHKSFPTGQALG
gm039438_Glyma1 ASHRK-------LAASGGEDQPTTTSSAASSANTASGG---RTHECSICHKSFPTGQALG
gm014082_Glyma0 ASHRK-------LAGENHPTSSAVTTSSASN----GGG---RTHECSICHKTFSTGQALG
gm008898_Glyma0 ASHRK-------LGGEHHSTSSAVTTSSASN----GGA---RTHECSICQKTFPTGQALG
                *****        ..      .: *:*. :     .*.   ::* ****:*:*.******

AT5G04340.1     GHKRCHYEGKNGGG---VSSSVS-NSEDVGSTSHVSSG-HRGFDLNIPPIPEFSMVNG-D
gm047952_Glyma1 GHKRCHYEGNGNGNNNNSNSVVTVASEGVGSTHTVSHGHHRDFDLNIPAFPDFSTKVG-E
gm039438_Glyma1 GHKRCHYEGNSNGNNNNSNSSVTAASEGVGSTHTVSHGHHRDFDLNIPAFPDFSTKVG-E
gm014082_Glyma0 GHKRCHYEG--------GNSAVT-ASEGVGSTHT---GSHRDFDLNLPAFPDFSARFFVD
gm008898_Glyma0 GHKRCHYEG--------GNSAVT-ASEGVGSTHT---GSHRDFDLNLPAFPDFSTRFFVD
                *********         .* *:  **.****     * **.****:*.:*:**     :

AT5G04340.1     EEVMSPMPAKKLRFDFP----EKP---
gm047952_Glyma1 DEVESPHPVMKKPRLFVIPKIEIPQFQ
gm039438_Glyma1 DEVESPHPVMKKPRPFVIPKIEIPQYQ
gm014082_Glyma0 DEVTSPHPSKKSRFNLTIPKIEIPQY-
gm008898_Glyma0 DEVTSPHPSKKSRLNLTIPKIEIPQY-
                :** ** *  *    :     * *
BoxShade v3.31 C (beta, 970507) Output
AT5G04340.1     M A L E T L T S P R L S S P M P T L F Q D S A L G F - - - H G S K G K R S K R - S R S E - - F D R Q S L T E D E Y I A L
gm047952_Glyma1    M A L E A L N S P T T T A P S F - P F D D P T I - - - - - P W A K R K R S K R - S R - - - - - D H P S - - E E E Y L A L
gm039438_Glyma1    M A L E T L N S P T T T A P S F - P F D D P T I - - - - - P W A K R K R S K R C S R - - - - - D H P S - - E E E Y L A L
gm014082_Glyma0    M A L E A L Q S P T T A T P S F S P F E E T S L S Y L E T P W T K G K R S K R - S R T E Q Q L Q H P S C T E E E Y L A L
gm008898_Glyma0    M A L E A L Q S P R T A T P S F S P F E E T N L S Y L E T P W T K G K R S K R - S R M E Q Q L Q H S S C T E E E Y L A L
 
AT5G04340.1     C L M L L A R D G D R N R D L D L P S S S S S P P L L P P L P T P I - - - - - - Y K C S V C D K A F S S Y Q A L G G H K
gm047952_Glyma1    C L I M L A R G G T T T V N N - - R H V S P P P P Q P Q P Q P T P D P S T K L S Y K C S V C D K S F P S Y Q A L G G H K
gm039438_Glyma1    C L I M L A R G G T T - - - - - - R R V S T P P - - - - P Q P T P D P S T K L S Y K C S V C N K S F P S Y Q A L G G H K
gm014082_Glyma0    C L I M L A R G G A G S V S - - - - - - T A K P A V S D N N S A P L S A A K L S Y K C S V C N K A F S S Y Q A L G G H K
gm008898_Glyma0    C L I M L A H G G A G G V P - - - - - - A A K P A V S D N N S A P L P A A K L S Y K C S V C N K A F S S Y Q A L G G H K
 
AT5G04340.1     A S H R K S F S L T Q S A G G D E L S T S S A I T T S G I S G - - - - G G G G S V K S H V C S I C H K S F A T G Q A L G
gm047952_Glyma1    A S H R K - - - - - - - L A G A A E D Q P P S T T T S S A A A T S S A S G G - - - K A H E C S I C H K S F P T G Q A L G
gm039438_Glyma1    A S H R K - - - - - - - L A A S G G E D Q P T T T S S A A S S A N T A S G G - - - R T H E C S I C H K S F P T G Q A L G
gm014082_Glyma0    A S H R K - - - - - - - L A G E N H P T S S A V T T S S A S N - - - - G G G - - - R T H E C S I C H K T F S T G Q A L G
gm008898_Glyma0    A S H R K - - - - - - - L G G E H H S T S S A V T T S S A S N - - - - G G A - - - R T H E C S I C Q K T F P T G Q A L G
 
AT5G04340.1     G H K R C H Y E G K N G G G - - - V S S S V S - N S E D V G S T S H V S S G - H R G F D L N I P P I P E F S M V N G - D
gm047952_Glyma1    G H K R C H Y E G N G N G N N N N S N S V V T V A S E G V G S T H T V S H G H H R D F D L N I P A F P D F S T K V G - E
gm039438_Glyma1    G H K R C H Y E G N S N G N N N N S N S S V T A A S E G V G S T H T V S H G H H R D F D L N I P A F P D F S T K V G - E
gm014082_Glyma0    G H K R C H Y E G - - - - - - - - G N S A V T - A S E G V G S T H T - - - G S H R D F D L N L P A F P D F S A R F F V D
gm008898_Glyma0    G H K R C H Y E G - - - - - - - - G N S A V T - A S E G V G S T H T - - - G S H R D F D L N L P A F P D F S T R F F V D
 
AT5G04340.1     E E V M S P M P A K K L R F D F P - - - - E K P - - -
gm047952_Glyma1    D E V E S P H P V M K K P R L F V I P K I E I P Q F Q
gm039438_Glyma1    D E V E S P H P V M K K P R P F V I P K I E I P Q Y Q
gm014082_Glyma0    D E V T S P H P S K K S R F N L T I P K I E I P Q Y -
gm008898_Glyma0    D E V T S P H P S K K S R L N L T I P K I E I P Q Y -
 
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