fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04390.1 ARTVVSLDLDLNLPAP at 306/362 in AT5G04390.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034639 KKARNALSLDLDLNLP in 239/290 AT5G04390.1 1st_1st 0.360957642 Ib
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04390.1     MEAFEEATKEQSLILKGKRTKRQRPQSPIPFSISPPIVSTPENNMEEEYTDLDSKDNALG
pt034639_POPTR_ MEASEEVAAN---VVKGKRTKRLRVQSPIPYG----------------------------
                *** **.: :   ::******* * *****:.                            

AT5G04390.1     NDEGNHKKDGVITSSSSSA----SWSSQNNHTLKAAEDEEDQDIANCLILLAQGHS--LP
pt034639_POPTR_ -----------LTANSSSGDGGTSWSPTSSINEFQDSTEEEEDMANCLILLAKGHSRDFP
                           :*:.***.    ***. .. .    . **::*:********:***  :*

AT5G04390.1     ----HNNHHLPNSNNNNTYRFTSRRFLETSSSNSGGKAGYYVYQCKTCDRTFPSFQALGG
pt034639_POPTR_ TQQQHRHQDYDSRGGADTTKFNSRKFLETANSTGSGKVGYYVYECKTCNRTFPSFQALGG
                    *.::.  . .. :* :*.**:****:.*...**.*****:****:***********

AT5G04390.1     HRASHKKPKAASFYSNLDLKKN-TYANDAVSLVHTTTTVFKNNNSRSLVVYGKASKNKVH
pt034639_POPTR_ HRASHKKPKAT---HNDERKKNLSPSSDEELDGH-----YKNVS--SLCTFSNHNKGKIH
                **********:    * : *** : :.*     *     :** .  ** .:.: .*.*:*

AT5G04390.1     ECGICGAEFTSGQALGGHMRRHRGAVVVPAVIAPTVTVATAAANTELSLSSMSFDQISDG
pt034639_POPTR_ ECSVCGAEFTSGQALGGHMRRHRGPLL--------------SSTTTLSLTPLAIES----
                **.:********************.::              ::.* ***:.::::.    

AT5G04390.1     HQDHLAMPAKKKARTVVSLDLDLNLPAPEDENRVNGFSFASKQNHEQEHQQKKQREEPKS
pt034639_POPTR_ -------EEPKKARNALSLDLDLNLPAPDDEK----FAFASKQQQHQQQQQQQQQSTP--
                          ****..:***********:**:    *:*****::.*::**::*:. *  

AT5G04390.1     LVLSAPTLVDCHY
pt034639_POPTR_ LVFSSPALVDCHY
                **:*:*:******
BoxShade v3.31 C (beta, 970507) Output
AT5G04390.1     M E A F E E A T K E Q S L I L K G K R T K R Q R P Q S P I P F S I S P P I V S T P E N N M E E E Y T D L D S K D N A L G
pt034639_POPTR_    M E A S E E V A A N - - - V V K G K R T K R L R V Q S P I P Y G - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G04390.1     N D E G N H K K D G V I T S S S S S A - - - - S W S S Q N N H T L K A A E D E E D Q D I A N C L I L L A Q G H S - - L P
pt034639_POPTR_    - - - - - - - - - - - L T A N S S S G D G G T S W S P T S S I N E F Q D S T E E E E D M A N C L I L L A K G H S R D F P
 
AT5G04390.1     - - - - H N N H H L P N S N N N N T Y R F T S R R F L E T S S S N S G G K A G Y Y V Y Q C K T C D R T F P S F Q A L G G
pt034639_POPTR_    T Q Q Q H R H Q D Y D S R G G A D T T K F N S R K F L E T A N S T G S G K V G Y Y V Y E C K T C N R T F P S F Q A L G G
 
AT5G04390.1     H R A S H K K P K A A S F Y S N L D L K K N - T Y A N D A V S L V H T T T T V F K N N N S R S L V V Y G K A S K N K V H
pt034639_POPTR_    H R A S H K K P K A T - - - H N D E R K K N L S P S S D E E L D G H - - - - - Y K N V S - - S L C T F S N H N K G K I H
 
AT5G04390.1     E C G I C G A E F T S G Q A L G G H M R R H R G A V V V P A V I A P T V T V A T A A A N T E L S L S S M S F D Q I S D G
pt034639_POPTR_    E C S V C G A E F T S G Q A L G G H M R R H R G P L L - - - - - - - - - - - - - - S S T T T L S L T P L A I E S - - - -
 
AT5G04390.1     H Q D H L A M P A K K K A R T V V S L D L D L N L P A P E D E N R V N G F S F A S K Q N H E Q E H Q Q K K Q R E E P K S
pt034639_POPTR_    - - - - - - - E E P K K A R N A L S L D L D L N L P A P D D E K - - - - F A F A S K Q Q Q H Q Q Q Q Q Q Q Q Q S T P - -
 
AT5G04390.1     L V L S A P T L V D C H Y
pt034639_POPTR_    L V F S S P A L V D C H Y
 
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