fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04390.1 ARTVVSLDLDLNLPAP at 306/362 in AT5G04390.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028261 GPASECLALALAAREP in 442/524 AT5G04390.1 1st_1st 0.255985267 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04390.1     MEAFEEA------------------TKEQSLILKGKRTKRQRPQSPIPFSISPPIVSTPE
Sb028261_Sorbi1 TREEEEAGTFLACFPHPTSSPAGMQTSSELQLLVAQRNKTTNTNTKTA-ALTTLLMTTPT
                 .  ***                  *..:  :* .:*.*  ..::  . :::. :::** 

AT5G04390.1     NNMEEEYTDLDSKDNALGNDEGNHKKDGVI--------------------TSSSSSASWS
Sb028261_Sorbi1 PTPTSSSTDDHSTADLAQVDDDSHGHHQPLAAAVKRKQRTKRPRHHPPAAASSCASASVS
                 .  .. ** .*. :    *:..* :.  :                    :**.:*** *

AT5G04390.1     SQNNHTLKAAEDEEDQDIANCLILLAQGHSL----------------PHNNHHLPNSNNN
Sb028261_Sorbi1 SSESTT------TEEEDMAHCLILLAQGASVVDSKPSPPVVLPSSTAPHQSQAPPRAE--
                *.:. *       *::*:*:******** *:                **:.:  *.::  

AT5G04390.1     NTYRFTSRRFLETSSSNSGGKAGYYVYQCKTCDRTFPSFQALGGHRASHKKPKAASFYSN
Sb028261_Sorbi1 ---RYTSRKYTEAAATPDGVRAGFYVYECKTCNKCFPTFQALGGHRASHKKPRLAA----
                   *:***:: *:::: .* :**:***:****:: **:**************: *:    

AT5G04390.1     LDLKKNTYAND---AVSLVHTTTTVFKNNNSRS----LVVYGK-----------------
Sb028261_Sorbi1 ------TADGDIAAAVNVDGTTTTGTMATASPSAPPPLVVQPRPLQTAAIDAAAAATAGA
                      *  .*   **.:  ****    . * *    ***  :                 

AT5G04390.1     ------------------ASKNKVHECGICGAEFTSGQALGGHMRRHRGAVVVPAVIAP-
Sb028261_Sorbi1 FPDVTITTALSLSSVATASGKLRVHECSICGAEFASGQALGGHMRRHR------PLNAPD
                                  :.* :****.******:*************      .: ** 

AT5G04390.1     ---TVTVATAAANTELSLSSMSFDQISDGHQDHLAMPAKKKARTVVSLDLDLNLPAPEDE
Sb028261_Sorbi1 RAVTVTTAIVAADTT-------------GNSN-----SKKESSAGINLELDLNLPAPSDE
                   ***.* .**:*              *:.:     :**:: : :.*:********.**

AT5G04390.1     NRVN-----------GFSFASKQNHEQEHQQKKQREEPKSLVLSAPTLVDCHY
Sb028261_Sorbi1 EAVVSRLPPPPAVMLGLG--------QFNDGKK-----AGLMLTASALVDCHY
                : *            *:.        * :: **      .*:*:*.:******
BoxShade v3.31 C (beta, 970507) Output
AT5G04390.1     M E A F E E A - - - - - - - - - - - - - - - - - - T K E Q S L I L K G K R T K R Q R P Q S P I P F S I S P P I V S T P E
Sb028261_Sorbi1    T R E E E E A G T F L A C F P H P T S S P A G M Q T S S E L Q L L V A Q R N K T T N T N T K T A - A L T T L L M T T P T
 
AT5G04390.1     N N M E E E Y T D L D S K D N A L G N D E G N H K K D G V I - - - - - - - - - - - - - - - - - - - - T S S S S S A S W S
Sb028261_Sorbi1    P T P T S S S T D D H S T A D L A Q V D D D S H G H H Q P L A A A V K R K Q R T K R P R H H P P A A A S S C A S A S V S
 
AT5G04390.1     S Q N N H T L K A A E D E E D Q D I A N C L I L L A Q G H S L - - - - - - - - - - - - - - - - P H N N H H L P N S N N N
Sb028261_Sorbi1    S S E S T T - - - - - - T E E E D M A H C L I L L A Q G A S V V D S K P S P P V V L P S S T A P H Q S Q A P P R A E - -
 
AT5G04390.1     N T Y R F T S R R F L E T S S S N S G G K A G Y Y V Y Q C K T C D R T F P S F Q A L G G H R A S H K K P K A A S F Y S N
Sb028261_Sorbi1    - - - R Y T S R K Y T E A A A T P D G V R A G F Y V Y E C K T C N K C F P T F Q A L G G H R A S H K K P R L A A - - - -
 
AT5G04390.1     L D L K K N T Y A N D - - - A V S L V H T T T T V F K N N N S R S - - - - L V V Y G K - - - - - - - - - - - - - - - - -
Sb028261_Sorbi1    - - - - - - T A D G D I A A A V N V D G T T T T G T M A T A S P S A P P P L V V Q P R P L Q T A A I D A A A A A T A G A
 
AT5G04390.1     - - - - - - - - - - - - - - - - - - A S K N K V H E C G I C G A E F T S G Q A L G G H M R R H R G A V V V P A V I A P -
Sb028261_Sorbi1    F P D V T I T T A L S L S S V A T A S G K L R V H E C S I C G A E F A S G Q A L G G H M R R H R - - - - - - P L N A P D
 
AT5G04390.1     - - - T V T V A T A A A N T E L S L S S M S F D Q I S D G H Q D H L A M P A K K K A R T V V S L D L D L N L P A P E D E
Sb028261_Sorbi1    R A V T V T T A I V A A D T T - - - - - - - - - - - - - G N S N - - - - - S K K E S S A G I N L E L D L N L P A P S D E
 
AT5G04390.1     N R V N - - - - - - - - - - - G F S F A S K Q N H E Q E H Q Q K K Q R E E P K S L V L S A P T L V D C H Y
Sb028261_Sorbi1    E A V V S R L P P P P A V M L G L G - - - - - - - - Q F N D G K K - - - - - A G L M L T A S A L V D C H Y
 
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