fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04390.1 ARTVVSLDLDLNLPAP at 306/362 in AT5G04390.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm055190 KRNVLNLDLDLNLPAP in 274/327 AT5G04390.1 1st_1st 0.364640883 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04390.1     MEAFEE----ATKEQSLILKGKRTKRQRPQSPIPFSISPPIVSTPENNMEEEYTDLDSKD
gm055190_Glyma2 MEAPEELSLGGSKDHTNIVKGKRTKRVRPQSPMPFSITSN-SSTGEGEKEEGCNNGDDDN
                *** **    .:*::: *:******* *****:****:.   ** *.: **  .: *..:

AT5G04390.1     NALGNDEGNHKKDGVITSSSSSASWSSQNNHTLKAAEDEEDQDIANCLILLAQGHSLPHN
gm055190_Glyma2 NNMKNEDINN-----INSSPTSSA-------GLQDSTDEE-EDMANCLILLAQGQSRESP
                * : *:: *:     *.**.:*::        *: : *** :*:**********:*    

AT5G04390.1     NHHLPNSNNNNTYRFTSRRFLETSSSNSGGKAGYYVYQCKTCDRTFPSFQALGGHRASHK
gm055190_Glyma2 KHAEEDAGMNSA-KYSSRKFLEAATLGS-SRAGYYVYECKTCNRTYPSFQALGGHRASHK
                :*   ::. *.: :::**:***::: .* .:******:****:**:**************

AT5G04390.1     KPKA--------------ASFYSNLDLKKNTYANDAVSL-VHTTTTVFKNNNSRSLVVYG
gm055190_Glyma2 KPKALMAIGLEKKQQHLLSTDEEEFQLKTN---KSPFSLQLNTKGNLYSNNN--------
                ****              ::  .:::**.*   :...** ::*. .::.***        

AT5G04390.1     KASKNKVHECGICGAEFTSGQALGGHMRRHRGAVVVPAVIAPTVTVATAAANTELSLSSM
gm055190_Glyma2 ---KSKVHECSICGAEFTSGQALGGHMRRHRAPV-------GTTTPAT------LSFTPL
                   *.*****.********************..*        *.* **      **::.:

AT5G04390.1     SFDQISDGHQDHLAMPAKKKARTVVSLDLDLNLPAPEDENRVNGFSFASKQNHEQEHQQK
gm055190_Glyma2 ALEP----EEDH---PRKK--RNVLNLDLDLNLPAPEDDHRESKFAFTSKQ---QQHQQP
                :::     .:**   * **  *.*:.************::* . *:*:***   *:*** 

AT5G04390.1     KQREEPK-SLVLSAPTLVDCHY
gm055190_Glyma2 QQQQQPQTSLVFPAPALVDCHY
                :*:::*: ***:.**:******
BoxShade v3.31 C (beta, 970507) Output
AT5G04390.1     M E A F E E - - - - A T K E Q S L I L K G K R T K R Q R P Q S P I P F S I S P P I V S T P E N N M E E E Y T D L D S K D
gm055190_Glyma2    M E A P E E L S L G G S K D H T N I V K G K R T K R V R P Q S P M P F S I T S N - S S T G E G E K E E G C N N G D D D N
 
AT5G04390.1     N A L G N D E G N H K K D G V I T S S S S S A S W S S Q N N H T L K A A E D E E D Q D I A N C L I L L A Q G H S L P H N
gm055190_Glyma2    N N M K N E D I N N - - - - - I N S S P T S S A - - - - - - - G L Q D S T D E E - E D M A N C L I L L A Q G Q S R E S P
 
AT5G04390.1     N H H L P N S N N N N T Y R F T S R R F L E T S S S N S G G K A G Y Y V Y Q C K T C D R T F P S F Q A L G G H R A S H K
gm055190_Glyma2    K H A E E D A G M N S A - K Y S S R K F L E A A T L G S - S R A G Y Y V Y E C K T C N R T Y P S F Q A L G G H R A S H K
 
AT5G04390.1     K P K A - - - - - - - - - - - - - - A S F Y S N L D L K K N T Y A N D A V S L - V H T T T T V F K N N N S R S L V V Y G
gm055190_Glyma2    K P K A L M A I G L E K K Q Q H L L S T D E E E F Q L K T N - - - K S P F S L Q L N T K G N L Y S N N N - - - - - - - -
 
AT5G04390.1     K A S K N K V H E C G I C G A E F T S G Q A L G G H M R R H R G A V V V P A V I A P T V T V A T A A A N T E L S L S S M
gm055190_Glyma2    - - - K S K V H E C S I C G A E F T S G Q A L G G H M R R H R A P V - - - - - - - G T T T P A T - - - - - - L S F T P L
 
AT5G04390.1     S F D Q I S D G H Q D H L A M P A K K K A R T V V S L D L D L N L P A P E D E N R V N G F S F A S K Q N H E Q E H Q Q K
gm055190_Glyma2    A L E P - - - - E E D H - - - P R K K - - R N V L N L D L D L N L P A P E D D H R E S K F A F T S K Q - - - Q Q H Q Q P
 
AT5G04390.1     K Q R E E P K - S L V L S A P T L V D C H Y
gm055190_Glyma2    Q Q Q Q Q P Q T S L V F P A P A L V D C H Y
 
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