fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029077 not found in 222aa AT5G04760.1 1st_1st 0.601449275 Ia
Pt035848 not found in 235aa AT5G04760.1 1st_1st 0.567632850 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G04760.1     ------------------MASSQWTRSEDKMFEQALVLFPEGSPNRWERIADQL-HKSAG
gm029077_Glyma1 ---------------------MEWTRYHDKLFERALLVVPEDLPDRWEKIADQVPGKSAV
pt035848_POPTR_ MHQDFNFQTRCLTQPPHATAATRWTREEDKIFEQALTIFPENLPDRWQSIANHI-RKSAW
                                      .*** .**:**:** :.**. *:**: **:::  *** 

AT5G04760.1     EVREHYEVLVHDVFEIDSGRVDVPDYMDDSAA----AAAG---WDS--------------
gm029077_Glyma1 EVREHYEALVHDVFEIDSGRVEVPSYVDDSVAMPPSGGAGISTWDN--------------
pt035848_POPTR_ EVKEHYDILVHDVLAIDSGRVELPTYRDDESV----------SWESSGGDDGGMVAAGAP
                **:***: *****: ******::* * **. .           *:.              

AT5G04760.1     -AGQISFGSK---HGESERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQ
gm029077_Glyma1 -ANQISFGSKLKQQGENERKKGTPWTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPTQ
pt035848_POPTR_ PSGQICFGGK--GKQDTERKKGTPWTEDEHKLFLVGLNKFGKGDWRSISRNVVITRTPTQ
                 :.**.**.*   : :.***:******:**:***:**.::*************:******

AT5G04760.1     VASHAQKYFLRQNSVKKERKRSSIHDITTVDATLA-MPGSNMDWTGQHGSPVQAPQQ---
gm029077_Glyma1 VASHAQKYFLRQNSVKKERKRSSIHDITTVDSNSAPMP-IDQTWVPPPGGSLQQSQQYPS
pt035848_POPTR_ VASHAQKYFLRQNSVKKERKRSSIHDITSVDNNTV-GPSADDYWNSPPGPPAN-------
                ****************************:** . .  *  :  *    * . :       

AT5G04760.1     ---QQIMSEFGQQLNPGHFEDFGFRM
gm029077_Glyma1 SNMHDQMGTFG-------YSNYGFDM
pt035848_POPTR_ ---QDGPPGLG-------YQNFRFQM
                   ::    :*       :.:: * *
BoxShade v3.31 C (beta, 970507) Output
AT5G04760.1     - - - - - - - - - - - - - - - - - - M A S S Q W T R S E D K M F E Q A L V L F P E G S P N R W E R I A D Q L - H K S A G
gm029077_Glyma1    - - - - - - - - - - - - - - - - - - - - - M E W T R Y H D K L F E R A L L V V P E D L P D R W E K I A D Q V P G K S A V
pt035848_POPTR_    M H Q D F N F Q T R C L T Q P P H A T A A T R W T R E E D K I F E Q A L T I F P E N L P D R W Q S I A N H I - R K S A W
 
AT5G04760.1     E V R E H Y E V L V H D V F E I D S G R V D V P D Y M D D S A A - - - - A A A G - - - W D S - - - - - - - - - - - - - -
gm029077_Glyma1    E V R E H Y E A L V H D V F E I D S G R V E V P S Y V D D S V A M P P S G G A G I S T W D N - - - - - - - - - - - - - -
pt035848_POPTR_    E V K E H Y D I L V H D V L A I D S G R V E L P T Y R D D E S V - - - - - - - - - - S W E S S G G D D G G M V A A G A P
 
AT5G04760.1     - A G Q I S F G S K - - - H G E S E R K R G T P W T E N E H K L F L I G L K R Y G K G D W R S I S R N V V V T R T P T Q
gm029077_Glyma1    - A N Q I S F G S K L K Q Q G E N E R K K G T P W T E E E H R L F L I G L S K F G K G D W R S I S R N V V V T R T P T Q
pt035848_POPTR_    P S G Q I C F G G K - - G K Q D T E R K K G T P W T E D E H K L F L V G L N K F G K G D W R S I S R N V V I T R T P T Q
 
AT5G04760.1     V A S H A Q K Y F L R Q N S V K K E R K R S S I H D I T T V D A T L A - M P G S N M D W T G Q H G S P V Q A P Q Q - - -
gm029077_Glyma1    V A S H A Q K Y F L R Q N S V K K E R K R S S I H D I T T V D S N S A P M P - I D Q T W V P P P G G S L Q Q S Q Q Y P S
pt035848_POPTR_    V A S H A Q K Y F L R Q N S V K K E R K R S S I H D I T S V D N N T V - G P S A D D Y W N S P P G P P A N - - - - - - -
 
AT5G04760.1     - - - Q Q I M S E F G Q Q L N P G H F E D F G F R M
gm029077_Glyma1    S N M H D Q M G T F G - - - - - - - Y S N Y G F D M
pt035848_POPTR_    - - - Q D G P P G L G - - - - - - - Y Q N F R F Q M
 
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