fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp028020 not found in 306aa AT5G08520.1 1st_not 0.427536231 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04760.1     MASSQ----------WTRSEDKMFEQALVLFPEGSPNRWERIADQLH-KSAGEVREHYEV
pp028020_Pp1s13 MADSQSSLTTASGSVWTREQDKEFENALNTYGEDTPNRWEEIASQVTGKDAAEVKRHYEI
                **.**          ***.:** **:**  : *.:*****.**.*:  *.*.**:.***:

AT5G04760.1     LVHDVFEIDSGRVDVPDY------------MDDSAAAAAGWDSAGQIS------------
pp028020_Pp1s13 LQEDINLIDSGRIALPSYRFSSLSLSEEGAASDSPGVKKGASFSAQVSGPNVNTNGNANG
                * .*:  *****: :*.*             .**...  * . :.*:*            

AT5G04760.1     ----------FGSKHGESERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPT
pp028020_Pp1s13 NGNAASGGKGVSSKTSDQERRKGIPWSEEEHRLFLLGLAKFGKGDWRSISRNFVISRTPT
                          ..** .:.**::* **:*:**:***:** ::***********.*::****

AT5G04760.1     QVASHAQKYFLRQNSVKKERKRSSIHDITTVDATLAMPGSNMDWTGQ------HGSPVQA
pp028020_Pp1s13 QVASHAQKYFIRLNSINKDKRRSSIHDITSVNNGDAAQQGQGPITGQPGPGSAAGQPIQG
                **********:* **::*:::********:*:   *   .:   ***       *.*:*.

AT5G04760.1     -------PQQQQIMSEFGQQLN---------PGHFEDFGFRM------------------
pp028020_Pp1s13 GMQSGIYPRQQMI----GQPPAVGAPVMLPPPGHVS-YGSRGHLPRPVMPGQQIGMAPHM
                       *:** *    **            ***.. :* *                   

AT5G04760.1     -----------
pp028020_Pp1s13 SYPMSQPGMHH
BoxShade v3.31 C (beta, 970507) Output
AT5G04760.1     M A S S Q - - - - - - - - - - W T R S E D K M F E Q A L V L F P E G S P N R W E R I A D Q L H - K S A G E V R E H Y E V
pp028020_Pp1s13    M A D S Q S S L T T A S G S V W T R E Q D K E F E N A L N T Y G E D T P N R W E E I A S Q V T G K D A A E V K R H Y E I
 
AT5G04760.1     L V H D V F E I D S G R V D V P D Y - - - - - - - - - - - - M D D S A A A A A G W D S A G Q I S - - - - - - - - - - - -
pp028020_Pp1s13    L Q E D I N L I D S G R I A L P S Y R F S S L S L S E E G A A S D S P G V K K G A S F S A Q V S G P N V N T N G N A N G
 
AT5G04760.1     - - - - - - - - - - F G S K H G E S E R K R G T P W T E N E H K L F L I G L K R Y G K G D W R S I S R N V V V T R T P T
pp028020_Pp1s13    N G N A A S G G K G V S S K T S D Q E R R K G I P W S E E E H R L F L L G L A K F G K G D W R S I S R N F V I S R T P T
 
AT5G04760.1     Q V A S H A Q K Y F L R Q N S V K K E R K R S S I H D I T T V D A T L A M P G S N M D W T G Q - - - - - - H G S P V Q A
pp028020_Pp1s13    Q V A S H A Q K Y F I R L N S I N K D K R R S S I H D I T S V N N G D A A Q Q G Q G P I T G Q P G P G S A A G Q P I Q G
 
AT5G04760.1     - - - - - - - P Q Q Q Q I M S E F G Q Q L N - - - - - - - - - P G H F E D F G F R M - - - - - - - - - - - - - - - - - -
pp028020_Pp1s13    G M Q S G I Y P R Q Q M I - - - - G Q P P A V G A P V M L P P P G H V S - Y G S R G H L P R P V M P G Q Q I G M A P H M
 
AT5G04760.1     - - - - - - - - - - -
pp028020_Pp1s13    S Y P M S Q P G M H H
 
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