fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030802 not found in 199aa AT5G04760.1 not_1st 0.432367149 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04760.1     MASSQWTRSEDKMFEQALVLFPEGSPNRWERIADQLHKSAGEVREHYEVLVHDVFEIDSG
pt030802_POPTR_ MQTNRQNLSRRSYV-----------PG----------KSWREVRKHYEDLVHDVLEIDSG
                * :.: . *. . .           *.          **  ***:*** *****:*****

AT5G04760.1     RVDVPDY-----MDDSAAAAAGWDSAGQISFGSKHGESERKRGTPWTENEHKLFLIGLKR
pt030802_POPTR_ RVEVPLYDQDELWGDSTTSLGG--AAAESRSGKEREHTERRKGTPWTEEEHRLFLIGLQK
                **:** *      .**::: .*  :*.:   *.:: .:**::******:**:******::

AT5G04760.1     YGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDATLAM---
pt030802_POPTR_ YGKGDWRSISRNAVVSRTPTQVASHAQKYFLRLNSVKKEKKRSSIHDITATNATHSMAQT
                ************.**:**************** ******:*********:.:** :*   

AT5G04760.1     ---PGSNMDWTGQH-GSPVQAPQQQQIMSEFGQQLNPGHFEDFGFRM
pt030802_POPTR_ SHDPNWNFELMDQSVDEPLSRPA-----NFFHDQGNPLAYQGFGFPM
                   *. *::  .*  ..*:. *      . * :* **  ::.*** *
BoxShade v3.31 C (beta, 970507) Output
AT5G04760.1     M A S S Q W T R S E D K M F E Q A L V L F P E G S P N R W E R I A D Q L H K S A G E V R E H Y E V L V H D V F E I D S G
pt030802_POPTR_    M Q T N R Q N L S R R S Y V - - - - - - - - - - - P G - - - - - - - - - - K S W R E V R K H Y E D L V H D V L E I D S G
 
AT5G04760.1     R V D V P D Y - - - - - M D D S A A A A A G W D S A G Q I S F G S K H G E S E R K R G T P W T E N E H K L F L I G L K R
pt030802_POPTR_    R V E V P L Y D Q D E L W G D S T T S L G G - - A A A E S R S G K E R E H T E R R K G T P W T E E E H R L F L I G L Q K
 
AT5G04760.1     Y G K G D W R S I S R N V V V T R T P T Q V A S H A Q K Y F L R Q N S V K K E R K R S S I H D I T T V D A T L A M - - -
pt030802_POPTR_    Y G K G D W R S I S R N A V V S R T P T Q V A S H A Q K Y F L R L N S V K K E K K R S S I H D I T A T N A T H S M A Q T
 
AT5G04760.1     - - - P G S N M D W T G Q H - G S P V Q A P Q Q Q Q I M S E F G Q Q L N P G H F E D F G F R M
pt030802_POPTR_    S H D P N W N F E L M D Q S V D E P L S R P A - - - - - N F F H D Q G N P L A Y Q G F G F P M
 
0