fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035848 not found in 235aa AT5G04760.1 1st_1st 0.567632850 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04760.1     ------------------MASSQWTRSEDKMFEQALVLFPEGSPNRWERIADQLHKSAGE
pt035848_POPTR_ MHQDFNFQTRCLTQPPHATAATRWTREEDKIFEQALTIFPENLPDRWQSIANHIRKSAWE
                                   *:::***.***:*****.:***. *:**: **::::*** *

AT5G04760.1     VREHYEVLVHDVFEIDSGRVDVPDYMDDSAAA------------AAGWDSAGQISFGSK-
pt035848_POPTR_ VKEHYDILVHDVLAIDSGRVELPTYRDDESVSWESSGGDDGGMVAAGAPPSGQICFGGKG
                *:***::*****: ******::* * **.:.:            ***  .:***.**.* 

AT5G04760.1     HGESERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQN
pt035848_POPTR_ KQDTERKKGTPWTEDEHKLFLVGLNKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQN
                : ::***:******:******:**:::*************:*******************

AT5G04760.1     SVKKERKRSSIHDITTVDATLAMPGSNMDWTGQHGSPVQAPQQQQIMSEFGQQLNPG-HF
pt035848_POPTR_ SVKKERKRSSIHDITSVDNNTVGPSADDYWNSPPGPPAN------------QDGPPGLGY
                ***************:** . . *.::  *..  *.*.:            *:  **  :

AT5G04760.1     EDFGFRM
pt035848_POPTR_ QNFRFQM
                ::* *:*
BoxShade v3.31 C (beta, 970507) Output
AT5G04760.1     - - - - - - - - - - - - - - - - - - M A S S Q W T R S E D K M F E Q A L V L F P E G S P N R W E R I A D Q L H K S A G E
pt035848_POPTR_    M H Q D F N F Q T R C L T Q P P H A T A A T R W T R E E D K I F E Q A L T I F P E N L P D R W Q S I A N H I R K S A W E
 
AT5G04760.1     V R E H Y E V L V H D V F E I D S G R V D V P D Y M D D S A A A - - - - - - - - - - - - A A G W D S A G Q I S F G S K -
pt035848_POPTR_    V K E H Y D I L V H D V L A I D S G R V E L P T Y R D D E S V S W E S S G G D D G G M V A A G A P P S G Q I C F G G K G
 
AT5G04760.1     H G E S E R K R G T P W T E N E H K L F L I G L K R Y G K G D W R S I S R N V V V T R T P T Q V A S H A Q K Y F L R Q N
pt035848_POPTR_    K Q D T E R K K G T P W T E D E H K L F L V G L N K F G K G D W R S I S R N V V I T R T P T Q V A S H A Q K Y F L R Q N
 
AT5G04760.1     S V K K E R K R S S I H D I T T V D A T L A M P G S N M D W T G Q H G S P V Q A P Q Q Q Q I M S E F G Q Q L N P G - H F
pt035848_POPTR_    S V K K E R K R S S I H D I T S V D N N T V G P S A D D Y W N S P P G P P A N - - - - - - - - - - - - Q D G P P G L G Y
 
AT5G04760.1     E D F G F R M
pt035848_POPTR_    Q N F R F Q M
 
0