fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030230 VTLSQGLQLKLVMHRS in 207/476 AT5G08520.1 1st_not 0.408212560 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04760.1     ---------------------------------------------------MASSQ----
Sb030230_Sorbi1 HSSYLAAPPPLHFRSPPKPRNPTRGIPRGRRLLRVHPPRGVSSGSASMAVEEASSSGGGG
                                                                    ***.    

AT5G04760.1     ------WTRSEDKMFEQALVLFPEGSPN---RWERIADQLH-KSAGEVREHYEVLVHDVF
Sb030230_Sorbi1 EEGCGAWTREQEKAFENAVATTMGGEEDGDARWEKLAEAVEGKTPEEVRRHYELLVEDVD
                      ***.::* **:*:.    *. :   ***::*: :. *:. ***.***:**.** 

AT5G04760.1     EIDSGRVDVPDYMDDSAAAAAGWDSAGQISFG-----------SKHGESERKRGTPWTEN
Sb030230_Sorbi1 GIESGRVPLPTYAADGAAEEGGGGGGGGKKGGGGGGTHGDKGSAKSAEQERRKGIAWTED
                 *:**** :* *  *.**  .* ...*  . *           :* .*.**::* .***:

AT5G04760.1     EHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDIT
Sb030230_Sorbi1 EHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRERRRSSIHDIT
                **:***:**::************.*::**************:* **:::**:********

AT5G04760.1     TV---DATLAMPGSNMDWTGQHGSP----VQAPQQQQ-------------------IMSE
Sb030230_Sorbi1 SVNNGDASTAQGPITGQTNGQAANPGKPSKQSPQPANTPPGVDAYGTTIGQPVGGPLVSA
                :*   **: *    . : .** ..*     *:**  :                   ::* 

AT5G04760.1     FGQQLN-----PGHFEDFGFRM----------------------------
Sb030230_Sorbi1 VGTPVTLPVSAPPHLA-YGMHAPVPGAVVPGAPVNIAPMPYPMPPPSSHG
                .*  :.     * *:  :*::
BoxShade v3.31 C (beta, 970507) Output
AT5G04760.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S S Q - - - -
Sb030230_Sorbi1    H S S Y L A A P P P L H F R S P P K P R N P T R G I P R G R R L L R V H P P R G V S S G S A S M A V E E A S S S G G G G
 
AT5G04760.1     - - - - - - W T R S E D K M F E Q A L V L F P E G S P N - - - R W E R I A D Q L H - K S A G E V R E H Y E V L V H D V F
Sb030230_Sorbi1    E E G C G A W T R E Q E K A F E N A V A T T M G G E E D G D A R W E K L A E A V E G K T P E E V R R H Y E L L V E D V D
 
AT5G04760.1     E I D S G R V D V P D Y M D D S A A A A A G W D S A G Q I S F G - - - - - - - - - - - S K H G E S E R K R G T P W T E N
Sb030230_Sorbi1    G I E S G R V P L P T Y A A D G A A E E G G G G G G G G K K G G G G G G T H G D K G S A K S A E Q E R R K G I A W T E D
 
AT5G04760.1     E H K L F L I G L K R Y G K G D W R S I S R N V V V T R T P T Q V A S H A Q K Y F L R Q N S V K K E R K R S S I H D I T
Sb030230_Sorbi1    E H R L F L L G L E K Y G K G D W R S I S R N F V I S R T P T Q V A S H A Q K Y F I R L N S M N R E R R R S S I H D I T
 
AT5G04760.1     T V - - - D A T L A M P G S N M D W T G Q H G S P - - - - V Q A P Q Q Q Q - - - - - - - - - - - - - - - - - - - I M S E
Sb030230_Sorbi1    S V N N G D A S T A Q G P I T G Q T N G Q A A N P G K P S K Q S P Q P A N T P P G V D A Y G T T I G Q P V G G P L V S A
 
AT5G04760.1     F G Q Q L N - - - - - P G H F E D F G F R M - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030230_Sorbi1    V G T P V T L P V S A P P H L A - Y G M H A P V P G A V V P G A P V N I A P M P Y P M P P P S S H G
 
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