fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb026128 not found in 378aa AT5G58900.1 not_not 0.408212560 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04760.1     ------MASSQ-----------------------------------------------WT
Sb026128_Sorbi1 FSPSSFFAASQTAPAQVGRHAAAKMMAEAAWTPVLFPPTVPCFWQPDTHPVFWRRGDAWT
                      :*:**                                               **

AT5G04760.1     RSEDKMFEQALVLFPEGSPNRWERIADQL-HKSAGEVREHYEVLVHDVFEIDSGRVDVPD
Sb026128_Sorbi1 AEENKKFEKALALIDRNAPDRWEKVAELLPRKTADDVRNHYHDLENDVGYIEAGLVPFPH
                 .*:* **:**.*: ..:*:***::*: * :*:*.:**:**. * :**  *::* * .*.

AT5G04760.1     YMDDSAAAAAG-----WDSAGQISFGSKHG----------ESERKRGTPWTENEHKLFLI
Sb026128_Sorbi1 Y--SSSVPSSGFTLEDWDAYGGGGGGFRRGGYCLKRSRGSDQERKKGVPWTEEEHKLFLM
                *  .*:..::*     **: *  . * ::*          :.***:*.****:******:

AT5G04760.1     GLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTV-----
Sb026128_Sorbi1 GLKKYGRGDWRNISRKYVTTRTPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPDE
                ***:**:****.***: *.***************:* **  *:::**********     

AT5G04760.1     ---DATLAMPGSNMDWTGQHGS--------PVQAPQQQQ-IMSEFGQQLNPGHFEDFGFR
Sb026128_Sorbi1 DRGNATPPSPPSAV--TAANPSVAALVDVKPFMAPRMKSGTVSAFSCPSPRGSSE-----
                   :** . * * :  *. : *        *. **: :.  :* *.     *  *     

AT5G04760.1     M
Sb026128_Sorbi1 -
BoxShade v3.31 C (beta, 970507) Output
AT5G04760.1     - - - - - - M A S S Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - W T
Sb026128_Sorbi1    F S P S S F F A A S Q T A P A Q V G R H A A A K M M A E A A W T P V L F P P T V P C F W Q P D T H P V F W R R G D A W T
 
AT5G04760.1     R S E D K M F E Q A L V L F P E G S P N R W E R I A D Q L - H K S A G E V R E H Y E V L V H D V F E I D S G R V D V P D
Sb026128_Sorbi1    A E E N K K F E K A L A L I D R N A P D R W E K V A E L L P R K T A D D V R N H Y H D L E N D V G Y I E A G L V P F P H
 
AT5G04760.1     Y M D D S A A A A A G - - - - - W D S A G Q I S F G S K H G - - - - - - - - - - E S E R K R G T P W T E N E H K L F L I
Sb026128_Sorbi1    Y - - S S S V P S S G F T L E D W D A Y G G G G G G F R R G G Y C L K R S R G S D Q E R K K G V P W T E E E H K L F L M
 
AT5G04760.1     G L K R Y G K G D W R S I S R N V V V T R T P T Q V A S H A Q K Y F L R Q N S V K K E R K R S S I H D I T T V - - - - -
Sb026128_Sorbi1    G L K K Y G R G D W R N I S R K Y V T T R T P T Q V A S H A Q K Y F I R L N S G G K D K R R S S I H D I T T V N L P D E
 
AT5G04760.1     - - - D A T L A M P G S N M D W T G Q H G S - - - - - - - - P V Q A P Q Q Q Q - I M S E F G Q Q L N P G H F E D F G F R
Sb026128_Sorbi1    D R G N A T P P S P P S A V - - T A A N P S V A A L V D V K P F M A P R M K S G T V S A F S C P S P R G S S E - - - - -
 
AT5G04760.1     M
Sb026128_Sorbi1    -
 
0