fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030230 VTLSQGLQLKLVMHRS in 207/476 AT5G08520.1 1st_not 0.408212560 II
Sb026128 not found in 378aa AT5G58900.1 not_not 0.408212560 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G04760.1     -----------------------------------------------------MASSQ--
Sb030230_Sorbi1 --HSSYLAAPPPLHFRSPPKPRNPTRGIPRGRRLLRVHPPRGVSSGSASMAVEEASSSGG
Sb026128_Sorbi1 FSPSSFFAAS-------------------------QTAPAQVGRHAAAKM---MAEAAWT
                                                                      *.:   

AT5G04760.1     ------------------------------WTRSEDKMFEQALVLFPEGSPN---RWERI
Sb030230_Sorbi1 G----------------------GEEGCGAWTREQEKAFENAVATTMGGEEDGDARWEKL
Sb026128_Sorbi1 PVLFPPTVPCFWQPDTHPVFWRRGD----AWTAEENKKFEKALALIDRNAPD---RWEKV
                                              ** .::* **:*:.    .  :   ***::

AT5G04760.1     ADQLH-KSAGEVREHYEVLVHDVFEIDSGRVDVPDYMDDSAAA--------AAGWDSAGQ
Sb030230_Sorbi1 AEAVEGKTPEEVRRHYELLVEDVDGIESGRVPLPTYAADGAAE--------EGGGGGGGG
Sb026128_Sorbi1 AELLPRKTADDVRNHYHDLENDVGYIEAGLVPFPHYSSSVPSSGFTLEDWDAYGGGGGGF
                *: :  *:. :**.**. * .**  *::* * .* *  . .:           * ...* 

AT5G04760.1     ISFG-----------SKHGESERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTR
Sb030230_Sorbi1 KKGGGGGGTHGDKGSAKSAEQERRKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVISR
Sb026128_Sorbi1 RRGG-----YCLKR-SRGSDQERKKGVPWTEEEHKLFLMGLKKYGRGDWRNISRKYVTTR
                   *           :: .:.**::* .***:**:***:**::**:****.***: * :*

AT5G04760.1     TPTQVASHAQKYFLRQNSVKKERKRSSIHDITTV--------DATLAMPGSNMDWTGQHG
Sb030230_Sorbi1 TPTQVASHAQKYFIRLNSMNRERRRSSIHDITSVN-----NGDASTAQGPITGQTNGQAA
Sb026128_Sorbi1 TPTQVASHAQKYFIRLNSGGKDKRRSSIHDITTVNLPDEDRGNATPPSPPSAV----TAA
                *************:* **  ::::********:*        :*: .            .

AT5G04760.1     SP-----------VQAPQQQQ-------------------IMSEFGQQLN-----PGHFE
Sb030230_Sorbi1 NPG-------KPSKQSPQPANTPPGVDAYGTTIGQPVGGPLVSAVGTPVTLPVSAPPHLA
Sb026128_Sorbi1 NPSVAALVDVKP-FMAPRMKS-----------------G-TVSAF--------SCPS---
                .*             :*:  .                    :* .          *    

AT5G04760.1     DFGFRM----------------------------
Sb030230_Sorbi1 -YGMHAPVPGAVVPGAPVNIAPMPYPMPPPSSHG
Sb026128_Sorbi1 ---------------------------PRGSSE-
BoxShade v3.31 C (beta, 970507) Output
AT5G04760.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A S S Q - -
Sb030230_Sorbi1    - - H S S Y L A A P P P L H F R S P P K P R N P T R G I P R G R R L L R V H P P R G V S S G S A S M A V E E A S S S G G
Sb026128_Sorbi1    F S P S S F F A A S - - - - - - - - - - - - - - - - - - - - - - - - - Q T A P A Q V G R H A A A K M - - - M A E A A W T
 
AT5G04760.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - W T R S E D K M F E Q A L V L F P E G S P N - - - R W E R I
Sb030230_Sorbi1    G - - - - - - - - - - - - - - - - - - - - - - G E E G C G A W T R E Q E K A F E N A V A T T M G G E E D G D A R W E K L
Sb026128_Sorbi1    P V L F P P T V P C F W Q P D T H P V F W R R G D - - - - A W T A E E N K K F E K A L A L I D R N A P D - - - R W E K V
 
AT5G04760.1     A D Q L H - K S A G E V R E H Y E V L V H D V F E I D S G R V D V P D Y M D D S A A A - - - - - - - - A A G W D S A G Q
Sb030230_Sorbi1    A E A V E G K T P E E V R R H Y E L L V E D V D G I E S G R V P L P T Y A A D G A A E - - - - - - - - E G G G G G G G G
Sb026128_Sorbi1    A E L L P R K T A D D V R N H Y H D L E N D V G Y I E A G L V P F P H Y S S S V P S S G F T L E D W D A Y G G G G G G F
 
AT5G04760.1     I S F G - - - - - - - - - - - S K H G E S E R K R G T P W T E N E H K L F L I G L K R Y G K G D W R S I S R N V V V T R
Sb030230_Sorbi1    K K G G G G G G T H G D K G S A K S A E Q E R R K G I A W T E D E H R L F L L G L E K Y G K G D W R S I S R N F V I S R
Sb026128_Sorbi1    R R G G - - - - - Y C L K R - S R G S D Q E R K K G V P W T E E E H K L F L M G L K K Y G R G D W R N I S R K Y V T T R
 
AT5G04760.1     T P T Q V A S H A Q K Y F L R Q N S V K K E R K R S S I H D I T T V - - - - - - - - D A T L A M P G S N M D W T G Q H G
Sb030230_Sorbi1    T P T Q V A S H A Q K Y F I R L N S M N R E R R R S S I H D I T S V N - - - - - N G D A S T A Q G P I T G Q T N G Q A A
Sb026128_Sorbi1    T P T Q V A S H A Q K Y F I R L N S G G K D K R R S S I H D I T T V N L P D E D R G N A T P P S P P S A V - - - - T A A
 
AT5G04760.1     S P - - - - - - - - - - - V Q A P Q Q Q Q - - - - - - - - - - - - - - - - - - - I M S E F G Q Q L N - - - - - P G H F E
Sb030230_Sorbi1    N P G - - - - - - - K P S K Q S P Q P A N T P P G V D A Y G T T I G Q P V G G P L V S A V G T P V T L P V S A P P H L A
Sb026128_Sorbi1    N P S V A A L V D V K P - F M A P R M K S - - - - - - - - - - - - - - - - - G - T V S A F - - - - - - - - S C P S - - -
 
AT5G04760.1     D F G F R M - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030230_Sorbi1    - Y G M H A P V P G A V V P G A P V N I A P M P Y P M P P P S S H G
Sb026128_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - P R G S S E -
 
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