fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04760.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm029077 not found in 222aa AT5G04760.1 1st_1st 0.601449275 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04760.1     MASSQWTRSEDKMFEQALVLFPEGSPNRWERIADQL-HKSAGEVREHYEVLVHDVFEIDS
gm029077_Glyma1 ---MEWTRYHDKLFERALLVVPEDLPDRWEKIADQVPGKSAVEVREHYEALVHDVFEIDS
                    :*** .**:**:**::.**. *:***:****:  *** *******.**********

AT5G04760.1     GRVDVPDYMDDSAA----AAAG---WDSAGQISFGSK---HGESERKRGTPWTENEHKLF
gm029077_Glyma1 GRVEVPSYVDDSVAMPPSGGAGISTWDNANQISFGSKLKQQGENERKKGTPWTEEEHRLF
                ***:**.*:***.*    ..**   **.*.*******   :**.***:******:**:**

AT5G04760.1     LIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDAT
gm029077_Glyma1 LIGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDSN
                ****.::***************************************************:.

AT5G04760.1     LA-MPGSNMDWTGQHGSPVQAPQQ------QQIMSEFGQQLNPGHFEDFGFRM
gm029077_Glyma1 SAPMP-IDQTWVPPPGGSLQQSQQYPSSNMHDQMGTFG-------YSNYGFDM
                 * **  :  *.   *..:* .**      :: *. **       :.::** *
BoxShade v3.31 C (beta, 970507) Output
AT5G04760.1     M A S S Q W T R S E D K M F E Q A L V L F P E G S P N R W E R I A D Q L - H K S A G E V R E H Y E V L V H D V F E I D S
gm029077_Glyma1    - - - M E W T R Y H D K L F E R A L L V V P E D L P D R W E K I A D Q V P G K S A V E V R E H Y E A L V H D V F E I D S
 
AT5G04760.1     G R V D V P D Y M D D S A A - - - - A A A G - - - W D S A G Q I S F G S K - - - H G E S E R K R G T P W T E N E H K L F
gm029077_Glyma1    G R V E V P S Y V D D S V A M P P S G G A G I S T W D N A N Q I S F G S K L K Q Q G E N E R K K G T P W T E E E H R L F
 
AT5G04760.1     L I G L K R Y G K G D W R S I S R N V V V T R T P T Q V A S H A Q K Y F L R Q N S V K K E R K R S S I H D I T T V D A T
gm029077_Glyma1    L I G L S K F G K G D W R S I S R N V V V T R T P T Q V A S H A Q K Y F L R Q N S V K K E R K R S S I H D I T T V D S N
 
AT5G04760.1     L A - M P G S N M D W T G Q H G S P V Q A P Q Q - - - - - - Q Q I M S E F G Q Q L N P G H F E D F G F R M
gm029077_Glyma1    S A P M P - I D Q T W V P P P G G S L Q Q S Q Q Y P S S N M H D Q M G T F G - - - - - - - Y S N Y G F D M
 
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