fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm054348 not found in 235aa AT5G04820.1 not_1st 0.437352245 II
Pt033655 not found in 210aa AT5G04820.1 not_1st 0.437352245 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G04820.1     MGKKKMKLSSLFKGGAG------GLLAVPLCYNAKTLSFRVG-DDMIKTVNSVFFDHHHN
gm054348_Glyma2 MGKKSLKLPSLFKTKEAPRNHHHPWQFMPSCGHSKTLSFRGGDDDMFKTVNSMFFDPSAE
pt033655_POPTR_ -----MKIPTLFRGKET----EHTWQKWPSCKHPKTLSFRAG-DDVIKTVNSVFFDPS--
                     :*:.:**:               * * :.****** * **::*****:***    

AT5G04820.1     NNNGGDLLEAETPESWFTNSSETASHSTESDQDL---DAESLEMVVRGVVRSERLFFDPG
gm054348_Glyma2 ST-------IETPKSWFTTSSESASISTES-EDYYYCDGESLEMLVRG-VRSERLFFEPG
pt033655_POPTR_ EG-------VETPESWFTDSSETTSFSTES-EDY---DGESLEVVVRG-VRSERLFFEPG
                .         ***:**** ***::* **** :*    *.****::*** ********:**

AT5G04820.1     VTSSILEEIEEKSKSDLKSKETVAVGEDRSTPIEEISVAVAMESEDPYGDFRRSMEEMVT
gm054348_Glyma2 DTSSILEK-----------------AKASGFPFKE-SVVLAMESEDPYEDFKRSMEEMVE
pt033655_POPTR_ DTNSILEE-----------------AKTGGFPFKE-SVELEMESEDPYVDFRRSMEEMVE
                 *.****:                 .:  . *::* ** : ******* **:******* 

AT5G04820.1     SHGELAKDWESLESMLAWYLRMNGRKSHGVIVSAFVDLLSGLSDSGAGITSASVSDSARY
gm054348_Glyma2 SHG--VRDWEGLEELLTWYLRVNGKNNHGFIVGAFVDLLFSLAASNG---SNTCSDSTSY
pt033655_POPTR_ SHG--LKDWDCLEELLGWYLKVNGKKNHGYIVGAFVDLLCGIAAA-------PCSDSTSS
                ***   :**: **.:* ***::**::.** **.****** .:: :       . ***:  

AT5G04820.1     STAVSSLPSSPVYSLSQGQTEI-------QEEERRSC
gm054348_Glyma2 SSAVSSFASSPL----SGQNEIVEHGIGNDD------
pt033655_POPTR_ SSS----PLCPL----KGHNEI-------DEEEQMV-
                *::    . .*:    .*:.**       ::
BoxShade v3.31 C (beta, 970507) Output
AT5G04820.1     M G K K K M K L S S L F K G G A G - - - - - - G L L A V P L C Y N A K T L S F R V G - D D M I K T V N S V F F D H H H N
gm054348_Glyma2    M G K K S L K L P S L F K T K E A P R N H H H P W Q F M P S C G H S K T L S F R G G D D D M F K T V N S M F F D P S A E
pt033655_POPTR_    - - - - - M K I P T L F R G K E T - - - - E H T W Q K W P S C K H P K T L S F R A G - D D V I K T V N S V F F D P S - -
 
AT5G04820.1     N N N G G D L L E A E T P E S W F T N S S E T A S H S T E S D Q D L - - - D A E S L E M V V R G V V R S E R L F F D P G
gm054348_Glyma2    S T - - - - - - - I E T P K S W F T T S S E S A S I S T E S - E D Y Y Y C D G E S L E M L V R G - V R S E R L F F E P G
pt033655_POPTR_    E G - - - - - - - V E T P E S W F T D S S E T T S F S T E S - E D Y - - - D G E S L E V V V R G - V R S E R L F F E P G
 
AT5G04820.1     V T S S I L E E I E E K S K S D L K S K E T V A V G E D R S T P I E E I S V A V A M E S E D P Y G D F R R S M E E M V T
gm054348_Glyma2    D T S S I L E K - - - - - - - - - - - - - - - - - A K A S G F P F K E - S V V L A M E S E D P Y E D F K R S M E E M V E
pt033655_POPTR_    D T N S I L E E - - - - - - - - - - - - - - - - - A K T G G F P F K E - S V E L E M E S E D P Y V D F R R S M E E M V E
 
AT5G04820.1     S H G E L A K D W E S L E S M L A W Y L R M N G R K S H G V I V S A F V D L L S G L S D S G A G I T S A S V S D S A R Y
gm054348_Glyma2    S H G - - V R D W E G L E E L L T W Y L R V N G K N N H G F I V G A F V D L L F S L A A S N G - - - S N T C S D S T S Y
pt033655_POPTR_    S H G - - L K D W D C L E E L L G W Y L K V N G K K N H G Y I V G A F V D L L C G I A A A - - - - - - - P C S D S T S S
 
AT5G04820.1     S T A V S S L P S S P V Y S L S Q G Q T E I - - - - - - - Q E E E R R S C
gm054348_Glyma2    S S A V S S F A S S P L - - - - S G Q N E I V E H G I G N D D - - - - - -
pt033655_POPTR_    S S S - - - - P L C P L - - - - K G H N E I - - - - - - - D E E E Q M V -
 
0