fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb018731 not found in 280aa AT5G04820.1 1st_1st 0.236406619 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04820.1     MGKKKMKLSSLFKG---------------------GAGGLL-------------------
Sb018731_Sorbi1 -MPKLLRQCKQARGVRPAGLIYLRPNEKWPPALLLSAGSLLLANVKEETREELQAQAQAG
                   * :: ..  :*                     .**.**                   

AT5G04820.1     ---------------------AVPLC--YNAKTLSFRVGDDM--IKTVNSVFFDHHHNNN
Sb018731_Sorbi1 AEAAAMVTTRSTNAVTMAEWVCLPLAPRYHASILSSHSQSPMPCAATISSM---------
                                     .:**.  *:*. ** :  . *    *:.*:         

AT5G04820.1     NGGDLLEAETPESWFTNSSETASHSTESDQDLDAES----LEMVVRGVVRSERLFFDPGV
Sb018731_Sorbi1 --------EARKSWYGSVESNATATLSSPKDEDAAAALAWAEEAARGRRRT------AGR
                        *: :**: . ...*: : .* :* ** :     * ..**  *:      .* 

AT5G04820.1     TSSILEEIE-------EKSKSDLKSKETVAVGEDRSTPIEEISVAVAMESEDPYGDFRRS
Sb018731_Sorbi1 AGGFLSRMELEGPWGSKRRRSSERSPRTMA------SAMSSAADAEAPDSVDWLSDAQSS
                :..:*..:*       :: :*. :* .*:*      :.:.. : * * :* *  .* : *

AT5G04820.1     MEEMVTSHGELAKDWESLESMLAWYLRMNGRKSHGVIVSAFVD-----------LLSGLS
Sb018731_Sorbi1 AWCVVVRAEELAKD-DSPES----------RKRDAMVL-AVADGVRKYWVVLGFLQEGHI
                   :*.   ***** :* **          ** ..::: *..*           * .*  

AT5G04820.1     DSGAGITSASVSDSARYSTAVSSLPSSPVYSLSQGQTEIQEEERRSC
Sb018731_Sorbi1 HAGGGAAAGGDGGGVSWAELVV-------------------------
                .:*.* ::.. .... ::  *
BoxShade v3.31 C (beta, 970507) Output
AT5G04820.1     M G K K K M K L S S L F K G - - - - - - - - - - - - - - - - - - - - - G A G G L L - - - - - - - - - - - - - - - - - - -
Sb018731_Sorbi1    - M P K L L R Q C K Q A R G V R P A G L I Y L R P N E K W P P A L L L S A G S L L L A N V K E E T R E E L Q A Q A Q A G
 
AT5G04820.1     - - - - - - - - - - - - - - - - - - - - - A V P L C - - Y N A K T L S F R V G D D M - - I K T V N S V F F D H H H N N N
Sb018731_Sorbi1    A E A A A M V T T R S T N A V T M A E W V C L P L A P R Y H A S I L S S H S Q S P M P C A A T I S S M - - - - - - - - -
 
AT5G04820.1     N G G D L L E A E T P E S W F T N S S E T A S H S T E S D Q D L D A E S - - - - L E M V V R G V V R S E R L F F D P G V
Sb018731_Sorbi1    - - - - - - - - E A R K S W Y G S V E S N A T A T L S S P K D E D A A A A L A W A E E A A R G R R R T - - - - - - A G R
 
AT5G04820.1     T S S I L E E I E - - - - - - - E K S K S D L K S K E T V A V G E D R S T P I E E I S V A V A M E S E D P Y G D F R R S
Sb018731_Sorbi1    A G G F L S R M E L E G P W G S K R R R S S E R S P R T M A - - - - - - S A M S S A A D A E A P D S V D W L S D A Q S S
 
AT5G04820.1     M E E M V T S H G E L A K D W E S L E S M L A W Y L R M N G R K S H G V I V S A F V D - - - - - - - - - - - L L S G L S
Sb018731_Sorbi1    A W C V V V R A E E L A K D - D S P E S - - - - - - - - - - R K R D A M V L - A V A D G V R K Y W V V L G F L Q E G H I
 
AT5G04820.1     D S G A G I T S A S V S D S A R Y S T A V S S L P S S P V Y S L S Q G Q T E I Q E E E R R S C
Sb018731_Sorbi1    H A G G G A A A G G D G G G V S W A E L V V - - - - - - - - - - - - - - - - - - - - - - - - -
 
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