fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt042360 not found in 214aa AT5G04820.1 1st_1st 0.465721040 Ia
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04820.1     MGKKKMKLSSLF--KGGAGGLLAVPLCYNAKTLSFRVGDDMIKTVNSVFFDHHHNNNNGG
pt042360_POPTR_ -----MKIPALFKIKETKQSWQKWPSCKHPKTLSFRGGDDVIKTVNSVFFDPSE------
                     **:.:**  *    .    * * :.****** ***:**********  .      

AT5G04820.1     DLLEAETPESWFTNSSETASHSTESDQDLDAESLEMVVRGVVRSERLFFDPGVTSSILEE
pt042360_POPTR_ ---RVETPESWFTNSSETTSFSTES-EGFDGESLEVVVRG-VRSERLFFEPGDTNSILEE
                   ..*************:*.**** :.:*.****:**** ********:** *.*****

AT5G04820.1     IEEKSKSDLKSKETVAVGEDRSTPIEEISVAVAMESEDPYGDFRRSMEEMVTSHGELAKD
pt042360_POPTR_ -----------------AKTGGFPFKE-SVVLAMESEDPYVDFRRSMEEMVESHG--LKD
                                 .:  . *::* **.:******** ********** ***   **

AT5G04820.1     WESLESMLAWYLRMNGRKSHGVIVSAFVDLLSGLSDSGAGITSASVSDSARYSTAVSSL-
pt042360_POPTR_ WDCLEELLGWYLKVNGKKNHGYIVGAFVDLL-------VGIAAASCSDSTSFSSAVSSFS
                *:.**.:*.***::**:*.** **.******       .**::** ***: :*:****: 

AT5G04820.1     PSSPVYSLSQGQTEIQEEERRSC
pt042360_POPTR_ PSSPLCSL-KGQNEIDEE-----
                ****: ** :**.**:**
BoxShade v3.31 C (beta, 970507) Output
AT5G04820.1     M G K K K M K L S S L F - - K G G A G G L L A V P L C Y N A K T L S F R V G D D M I K T V N S V F F D H H H N N N N G G
pt042360_POPTR_    - - - - - M K I P A L F K I K E T K Q S W Q K W P S C K H P K T L S F R G G D D V I K T V N S V F F D P S E - - - - - -
 
AT5G04820.1     D L L E A E T P E S W F T N S S E T A S H S T E S D Q D L D A E S L E M V V R G V V R S E R L F F D P G V T S S I L E E
pt042360_POPTR_    - - - R V E T P E S W F T N S S E T T S F S T E S - E G F D G E S L E V V V R G - V R S E R L F F E P G D T N S I L E E
 
AT5G04820.1     I E E K S K S D L K S K E T V A V G E D R S T P I E E I S V A V A M E S E D P Y G D F R R S M E E M V T S H G E L A K D
pt042360_POPTR_    - - - - - - - - - - - - - - - - - A K T G G F P F K E - S V V L A M E S E D P Y V D F R R S M E E M V E S H G - - L K D
 
AT5G04820.1     W E S L E S M L A W Y L R M N G R K S H G V I V S A F V D L L S G L S D S G A G I T S A S V S D S A R Y S T A V S S L -
pt042360_POPTR_    W D C L E E L L G W Y L K V N G K K N H G Y I V G A F V D L L - - - - - - - V G I A A A S C S D S T S F S S A V S S F S
 
AT5G04820.1     P S S P V Y S L S Q G Q T E I Q E E E R R S C
pt042360_POPTR_    P S S P L C S L - K G Q N E I D E E - - - - -
 
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