Input
| Putative repression domain
|
|
AT5G04820.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt042360 |
not found in 214aa |
AT5G04820.1 |
1st_1st |
0.465721040 |
Ia |
Pt033655 |
not found in 210aa |
AT5G04820.1 |
not_1st |
0.437352245 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT5G04820.1 MGKKKMKLSSLFKGGAG--GLLAVPLCYNAKTLSFRVGDDMIKTVNSVFFDHHHNNNNGG
pt042360_POPTR_ -----MKIPALFKIKETKQSWQKWPSCKHPKTLSFRGGDDVIKTVNSVFFDPSER-----
pt033655_POPTR_ -----MKIPTLFRGKETEHTWQKWPSCKHPKTLSFRAGDDVIKTVNSVFFDPSEG-----
**:.:**: * * :.****** ***:********** .
AT5G04820.1 DLLEAETPESWFTNSSETASHSTESDQDLDAESLEMVVRGVVRSERLFFDPGVTSSILEE
pt042360_POPTR_ ----VETPESWFTNSSETTSFSTES-EGFDGESLEVVVRG-VRSERLFFEPGDTNSILEE
pt033655_POPTR_ ----VETPESWFTDSSETTSFSTES-EDYDGESLEVVVRG-VRSERLFFEPGDTNSILEE
.********:****:*.**** :. *.****:**** ********:** *.*****
AT5G04820.1 IEEKSKSDLKSKETVAVGEDRSTPIEEISVAVAMESEDPYGDFRRSMEEMVTSHGELAKD
pt042360_POPTR_ -----------------AKTGGFPFKE-SVVLAMESEDPYVDFRRSMEEMVESHG--LKD
pt033655_POPTR_ -----------------AKTGGFPFKE-SVELEMESEDPYVDFRRSMEEMVESHG--LKD
.: . *::* ** : ******* ********** *** **
AT5G04820.1 WESLESMLAWYLRMNGRKSHGVIVSAFVDLLSGLSDSGAGITSASVSDSARYSTAVSS-L
pt042360_POPTR_ WDCLEELLGWYLKVNGKKNHGYIVGAFVDLL-------VGIAAASCSDSTSFSSAVSSFS
pt033655_POPTR_ WDCLEELLGWYLKVNGKKNHGYIVGAFVDLL-------CGIAAAPCSDSTS--------S
*:.**.:*.***::**:*.** **.****** **::*. ***:
AT5G04820.1 PSSPVYSLSQGQTEIQEEERRSC
pt042360_POPTR_ PSSPLCSL-KGQNEIDEE-----
pt033655_POPTR_ SSSPLCPL-KGHNEIDEEEQMV-
.***: .* :*:.**:**
BoxShade v3.31 C (beta, 970507) Output
AT5G04820.1 |
M |
G |
K |
K |
K |
M |
K |
L |
S |
S |
L |
F |
K |
G |
G |
A |
G |
- |
- |
G |
L |
L |
A |
V |
P |
L |
C |
Y |
N |
A |
K |
T |
L |
S |
F |
R |
V |
G |
D |
D |
M |
I |
K |
T |
V |
N |
S |
V |
F |
F |
D |
H |
H |
H |
N |
N |
N |
N |
G |
G |
pt042360_POPTR_ |
- |
- |
- |
- |
- |
M |
K |
I |
P |
A |
L |
F |
K |
I |
K |
E |
T |
K |
Q |
S |
W |
Q |
K |
W |
P |
S |
C |
K |
H |
P |
K |
T |
L |
S |
F |
R |
G |
G |
D |
D |
V |
I |
K |
T |
V |
N |
S |
V |
F |
F |
D |
P |
S |
E |
R |
- |
- |
- |
- |
- |
pt033655_POPTR_ |
- |
- |
- |
- |
- |
M |
K |
I |
P |
T |
L |
F |
R |
G |
K |
E |
T |
E |
H |
T |
W |
Q |
K |
W |
P |
S |
C |
K |
H |
P |
K |
T |
L |
S |
F |
R |
A |
G |
D |
D |
V |
I |
K |
T |
V |
N |
S |
V |
F |
F |
D |
P |
S |
E |
G |
- |
- |
- |
- |
- |
|
AT5G04820.1 |
D |
L |
L |
E |
A |
E |
T |
P |
E |
S |
W |
F |
T |
N |
S |
S |
E |
T |
A |
S |
H |
S |
T |
E |
S |
D |
Q |
D |
L |
D |
A |
E |
S |
L |
E |
M |
V |
V |
R |
G |
V |
V |
R |
S |
E |
R |
L |
F |
F |
D |
P |
G |
V |
T |
S |
S |
I |
L |
E |
E |
pt042360_POPTR_ |
- |
- |
- |
- |
V |
E |
T |
P |
E |
S |
W |
F |
T |
N |
S |
S |
E |
T |
T |
S |
F |
S |
T |
E |
S |
- |
E |
G |
F |
D |
G |
E |
S |
L |
E |
V |
V |
V |
R |
G |
- |
V |
R |
S |
E |
R |
L |
F |
F |
E |
P |
G |
D |
T |
N |
S |
I |
L |
E |
E |
pt033655_POPTR_ |
- |
- |
- |
- |
V |
E |
T |
P |
E |
S |
W |
F |
T |
D |
S |
S |
E |
T |
T |
S |
F |
S |
T |
E |
S |
- |
E |
D |
Y |
D |
G |
E |
S |
L |
E |
V |
V |
V |
R |
G |
- |
V |
R |
S |
E |
R |
L |
F |
F |
E |
P |
G |
D |
T |
N |
S |
I |
L |
E |
E |
|
AT5G04820.1 |
I |
E |
E |
K |
S |
K |
S |
D |
L |
K |
S |
K |
E |
T |
V |
A |
V |
G |
E |
D |
R |
S |
T |
P |
I |
E |
E |
I |
S |
V |
A |
V |
A |
M |
E |
S |
E |
D |
P |
Y |
G |
D |
F |
R |
R |
S |
M |
E |
E |
M |
V |
T |
S |
H |
G |
E |
L |
A |
K |
D |
pt042360_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
A |
K |
T |
G |
G |
F |
P |
F |
K |
E |
- |
S |
V |
V |
L |
A |
M |
E |
S |
E |
D |
P |
Y |
V |
D |
F |
R |
R |
S |
M |
E |
E |
M |
V |
E |
S |
H |
G |
- |
- |
L |
K |
D |
pt033655_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
A |
K |
T |
G |
G |
F |
P |
F |
K |
E |
- |
S |
V |
E |
L |
E |
M |
E |
S |
E |
D |
P |
Y |
V |
D |
F |
R |
R |
S |
M |
E |
E |
M |
V |
E |
S |
H |
G |
- |
- |
L |
K |
D |
|
AT5G04820.1 |
W |
E |
S |
L |
E |
S |
M |
L |
A |
W |
Y |
L |
R |
M |
N |
G |
R |
K |
S |
H |
G |
V |
I |
V |
S |
A |
F |
V |
D |
L |
L |
S |
G |
L |
S |
D |
S |
G |
A |
G |
I |
T |
S |
A |
S |
V |
S |
D |
S |
A |
R |
Y |
S |
T |
A |
V |
S |
S |
- |
L |
pt042360_POPTR_ |
W |
D |
C |
L |
E |
E |
L |
L |
G |
W |
Y |
L |
K |
V |
N |
G |
K |
K |
N |
H |
G |
Y |
I |
V |
G |
A |
F |
V |
D |
L |
L |
- |
- |
- |
- |
- |
- |
- |
V |
G |
I |
A |
A |
A |
S |
C |
S |
D |
S |
T |
S |
F |
S |
S |
A |
V |
S |
S |
F |
S |
pt033655_POPTR_ |
W |
D |
C |
L |
E |
E |
L |
L |
G |
W |
Y |
L |
K |
V |
N |
G |
K |
K |
N |
H |
G |
Y |
I |
V |
G |
A |
F |
V |
D |
L |
L |
- |
- |
- |
- |
- |
- |
- |
C |
G |
I |
A |
A |
A |
P |
C |
S |
D |
S |
T |
S |
- |
- |
- |
- |
- |
- |
- |
- |
S |
|
AT5G04820.1 |
P |
S |
S |
P |
V |
Y |
S |
L |
S |
Q |
G |
Q |
T |
E |
I |
Q |
E |
E |
E |
R |
R |
S |
C |
pt042360_POPTR_ |
P |
S |
S |
P |
L |
C |
S |
L |
- |
K |
G |
Q |
N |
E |
I |
D |
E |
E |
- |
- |
- |
- |
- |
pt033655_POPTR_ |
S |
S |
S |
P |
L |
C |
P |
L |
- |
K |
G |
H |
N |
E |
I |
D |
E |
E |
E |
Q |
M |
V |
- |
|
|