fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm054348 not found in 235aa AT5G04820.1 not_1st 0.437352245 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04820.1     MGKKKMKLSSLFKGGAG------GLLAVPLCYNAKTLSFRVG-DDMIKTVNSVFFDHHHN
gm054348_Glyma2 MGKKSLKLPSLFKTKEAPRNHHHPWQFMPSCGHSKTLSFRGGDDDMFKTVNSMFFDPSAE
                ****.:**.****   .          :* * ::****** * ***:*****:***   :

AT5G04820.1     NNNGGDLLEAETPESWFTNSSETASHSTESDQDL--DAESLEMVVRGVVRSERLFFDPGV
gm054348_Glyma2 ST-------IETPKSWFTTSSESASISTESEDYYYCDGESLEMLVRG-VRSERLFFEPGD
                ..        ***:****.***:** ****::    *.*****:*** ********:** 

AT5G04820.1     TSSILEEIEEKSKSDLKSKETVAVGEDRSTPIEEISVAVAMESEDPYGDFRRSMEEMVTS
gm054348_Glyma2 TSSIL----EKAKAS-------------GFPFKE-SVVLAMESEDPYEDFKRSMEEMVES
                *****    **:*:.             . *::* **.:******** **:******* *

AT5G04820.1     HGELAKDWESLESMLAWYLRMNGRKSHGVIVSAFVDLLSGLSDSGAGITSASVSDSARYS
gm054348_Glyma2 HG--VRDWEGLEELLTWYLRVNGKNNHGFIVGAFVDLLFSLAASNG---SNTCSDSTSYS
                **  .:***.**.:*:****:**::.**.**.****** .*: *..   * : ***: **

AT5G04820.1     TAVSSLPSSPVYSLSQGQTEIQE-----EERRSC
gm054348_Glyma2 SAVSSFASSPL----SGQNEIVEHGIGNDD----
                :****:.***:    .**.** *     ::
BoxShade v3.31 C (beta, 970507) Output
AT5G04820.1     M G K K K M K L S S L F K G G A G - - - - - - G L L A V P L C Y N A K T L S F R V G - D D M I K T V N S V F F D H H H N
gm054348_Glyma2    M G K K S L K L P S L F K T K E A P R N H H H P W Q F M P S C G H S K T L S F R G G D D D M F K T V N S M F F D P S A E
 
AT5G04820.1     N N N G G D L L E A E T P E S W F T N S S E T A S H S T E S D Q D L - - D A E S L E M V V R G V V R S E R L F F D P G V
gm054348_Glyma2    S T - - - - - - - I E T P K S W F T T S S E S A S I S T E S E D Y Y Y C D G E S L E M L V R G - V R S E R L F F E P G D
 
AT5G04820.1     T S S I L E E I E E K S K S D L K S K E T V A V G E D R S T P I E E I S V A V A M E S E D P Y G D F R R S M E E M V T S
gm054348_Glyma2    T S S I L - - - - E K A K A S - - - - - - - - - - - - - G F P F K E - S V V L A M E S E D P Y E D F K R S M E E M V E S
 
AT5G04820.1     H G E L A K D W E S L E S M L A W Y L R M N G R K S H G V I V S A F V D L L S G L S D S G A G I T S A S V S D S A R Y S
gm054348_Glyma2    H G - - V R D W E G L E E L L T W Y L R V N G K N N H G F I V G A F V D L L F S L A A S N G - - - S N T C S D S T S Y S
 
AT5G04820.1     T A V S S L P S S P V Y S L S Q G Q T E I Q E - - - - - E E R R S C
gm054348_Glyma2    S A V S S F A S S P L - - - - S G Q N E I V E H G I G N D D - - - -
 
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