fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035559 not found in 294aa AT5G04840.1 not_1st 0.420952380 II
Pt035558 not found in 294aa AT5G04840.1 not_1st 0.420952380 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G04840.1     MSRPAPLPPRCPIPKKLSLSPVADTFYSSSSPIESYIGQYKSSTQDSRLEDQPAWLDELL
pt035558_POPTR_ MSRQSLLPPRCPFQKPVVSRPIHD----------SYPQHHRSPSQGSILGEKPAWLDDLL
pt035559_POPTR_ MSRQSLLPPRCPFQKPVVSRPIHD----------SYPQHHRSPSQGSILGEKPAWLDDLL
                *** : ******: * :   *: *          **  :::*.:*.* * ::*****:**

AT5G04840.1     CDKTDGLLTRGGPLRRSASDSVVLLGDISATFSGFDQSEDE-ESLSSEACGDLESACVYG
pt035558_POPTR_ SDEDAD--SRGTCLRRSASDSVTLLEGIVDSFSGSSPYNNEAASGGGETCSGLESASMYG
pt035559_POPTR_ SDEDAD--SRGTCLRRSASDSVTLLEGIVDSFSGSSPYNNEAASGGGETCSGLESASMYG
                .*:  .  :**  *********.** .*  :*** .  ::*  * ..*:*..****.:**

AT5G04840.1     PNSPRAKNNSSFSNNPIASAFSDYGSQTPPQNLDDTVKGINRSPVAE--NACGSMGIPNA
pt035558_POPTR_ PNSPRRRGNVTFSENAIASALSEYAFQNPLQYVDGSLCIWGNTPLDSMGNACGSAGELNG
pt035559_POPTR_ PNSPRRRGNVTFSENAIASALSEYAFQNPLQYVDGSLCIWGNTPLDSMGNACGSAGELNG
                ***** :.* :**:*.****:*:*. *.* * :*.::   ..:*: .  ***** *  *.

AT5G04840.1     -----KRNPGQRSRVRKLQYIAELERTVGMLQTVEADLSVRVASLLQTRATLSLENSQLK
pt035558_POPTR_ ETSTVKRQSGQRSRVRKLQYIAELERTVNVLQTLESELAFKVASMLQKRAALSLENNTLK
pt035559_POPTR_ ETSTVKRQSGQRSRVRKLQYIAELERTVNVLQTLESELAFKVASMLQKRAALSLENNTLK
                     **:.*******************.:***:*::*:.:***:**.**:*****. **

AT5G04840.1     QQMAILKQDKLIREGEYQLLKKEAQRLKSGLGYLGSTNNSNRLVRSYSAGSNVAPRTASS
pt035558_POPTR_ QQVARLRQEKLIVDAQHKTLKKEAERLKNKLG--SSTNNK---FRTYSR-SSLSPEAARS
pt035559_POPTR_ QQVARLRQEKLIVDAQHKTLKKEAERLKNKLG--SSTNNK---FRTYSR-SSLSPEAARS
                **:* *:*:*** :.::: *****:***. **  .****.   .*:**  *.::*.:* *

AT5G04840.1     HLDWNLLDLTKLNLN
pt035558_POPTR_ EVTWQ---MARLNLN
pt035559_POPTR_ EVTWQ---MARLNLN
                .: *:   :::****
BoxShade v3.31 C (beta, 970507) Output
AT5G04840.1     M S R P A P L P P R C P I P K K L S L S P V A D T F Y S S S S P I E S Y I G Q Y K S S T Q D S R L E D Q P A W L D E L L
pt035558_POPTR_    M S R Q S L L P P R C P F Q K P V V S R P I H D - - - - - - - - - - S Y P Q H H R S P S Q G S I L G E K P A W L D D L L
pt035559_POPTR_    M S R Q S L L P P R C P F Q K P V V S R P I H D - - - - - - - - - - S Y P Q H H R S P S Q G S I L G E K P A W L D D L L
 
AT5G04840.1     C D K T D G L L T R G G P L R R S A S D S V V L L G D I S A T F S G F D Q S E D E - E S L S S E A C G D L E S A C V Y G
pt035558_POPTR_    S D E D A D - - S R G T C L R R S A S D S V T L L E G I V D S F S G S S P Y N N E A A S G G G E T C S G L E S A S M Y G
pt035559_POPTR_    S D E D A D - - S R G T C L R R S A S D S V T L L E G I V D S F S G S S P Y N N E A A S G G G E T C S G L E S A S M Y G
 
AT5G04840.1     P N S P R A K N N S S F S N N P I A S A F S D Y G S Q T P P Q N L D D T V K G I N R S P V A E - - N A C G S M G I P N A
pt035558_POPTR_    P N S P R R R G N V T F S E N A I A S A L S E Y A F Q N P L Q Y V D G S L C I W G N T P L D S M G N A C G S A G E L N G
pt035559_POPTR_    P N S P R R R G N V T F S E N A I A S A L S E Y A F Q N P L Q Y V D G S L C I W G N T P L D S M G N A C G S A G E L N G
 
AT5G04840.1     - - - - - K R N P G Q R S R V R K L Q Y I A E L E R T V G M L Q T V E A D L S V R V A S L L Q T R A T L S L E N S Q L K
pt035558_POPTR_    E T S T V K R Q S G Q R S R V R K L Q Y I A E L E R T V N V L Q T L E S E L A F K V A S M L Q K R A A L S L E N N T L K
pt035559_POPTR_    E T S T V K R Q S G Q R S R V R K L Q Y I A E L E R T V N V L Q T L E S E L A F K V A S M L Q K R A A L S L E N N T L K
 
AT5G04840.1     Q Q M A I L K Q D K L I R E G E Y Q L L K K E A Q R L K S G L G Y L G S T N N S N R L V R S Y S A G S N V A P R T A S S
pt035558_POPTR_    Q Q V A R L R Q E K L I V D A Q H K T L K K E A E R L K N K L G - - S S T N N K - - - F R T Y S R - S S L S P E A A R S
pt035559_POPTR_    Q Q V A R L R Q E K L I V D A Q H K T L K K E A E R L K N K L G - - S S T N N K - - - F R T Y S R - S S L S P E A A R S
 
AT5G04840.1     H L D W N L L D L T K L N L N
pt035558_POPTR_    E V T W Q - - - M A R L N L N
pt035559_POPTR_    E V T W Q - - - M A R L N L N
 
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