fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os008181 not found in 326aa AT5G04840.1 1st_1st 0.302857142 Ib
Sb027312 not found in 372aa AT5G04840.1 1st_1st 0.28 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G04840.1     --------------------MSRPAPLPPRCPIPKKLSLSPVADTFYSSSSPIESYIGQY
Os008181_Os02t0 --------------------MSRSPHLPPRCP-PLGPQITRRDDSLFTQSCRFPS-----
Sb027312_Sorbi1 LLISRAKRGRPSKIRGLVLAMSRSPHLPPRCP-PLGPQITRRDDSMFTQSCRFPS-----
                                    ***.. ****** *   .::   *::::.*. : *     

AT5G04840.1     KSSTQDSRLEDQPAWLDELLCDKTDGLLTRGGPLRRSASDSVVLLGDISATFS-------
Os008181_Os02t0 ----EDPFVGEPPCWLDDLLADS--GKSHTLPPLRRACSDSDAIL-DVLTSFQSPIYPID
Sb027312_Sorbi1 ----GDPFFGEPPCWLDDLLADS--GKAPKLPPLRRACSDSDAIL-DALSTFQSPIYPIE
                     *. . : *.***:**.*.  *      ****:.*** .:* *  ::*.       

AT5G04840.1     -GFDQSEDE--ESLSSEACGD-----LESACVYGPNSPRAKNNSSFSNNPIASAFSDYGS
Os008181_Os02t0 EGDPQPVGEAGESFNAAAEGGGSGAGIEGSCVYGPNSPRQKTRLTSSESSMVNAVLENVP
Sb027312_Sorbi1 EGDLNSGGE-GEDLLDAGEGGESGSVVEACCVYGPNSPRQKSRLTSSESSMVNAVLENVP
                 *  :. .*  *.:   . *.     :*..********* *.. : *:..:..*. :  .

AT5G04840.1     QTPPQNLD-DTVKGINRSPVAENACGSMGIP----------NAKRNPGQRSRVRKLQYIA
Os008181_Os02t0 SNPLQYLMIDATSGVNCNVGAANGTGDTGDA--VCHADQEKSLKRRSGQRSRVRKLQYIA
Sb027312_Sorbi1 SNPLQYLTIDASSGVNGNV--ASGTADASDAFGFGHPDQDKSFKRRSGQRSRVRKLQYIA
                ..* * *  *: .*:* .    .. .. . .          . **..*************

AT5G04840.1     ELERTVGMLQTVEADLSVRVASLLQTRATLSLENSQLKQQMAILKQDKLIREGEYQLLKK
Os008181_Os02t0 DLERTVDSLQNIGADLAVRVASLFQLRNALSMENKQLRRQITSLQQAKLIKDGQTQMLKK
Sb027312_Sorbi1 ELERTVDSLQNMGADLAVRVSSLFQLHSALSMENKQLRMQISSLQHAKLIKDGQTQALKN
                :*****. **.: ***:***:**:* : :**:**.**: *:: *:: ***::*: * **:

AT5G04840.1     EAQRLKSGLGYLGSTNNSNRLVRSYSAGSNVAPRTA----SSHLDWNLLDLTKLNLN---
Os008181_Os02t0 ETERLK---------QLSVRHRRSRSVTSCFEANSFGGGDPSAINWQMLDMSKLSLNGGA
Sb027312_Sorbi1 EAERLK---------QMSARHRRSRSVTSCYDPTSF-GADASAVNWQMPDMGRLSLNGSS
                *::***         : * *  ** *. *   . :     .* ::*:: *: :*.**   

AT5G04840.1     ----------
Os008181_Os02t0 VVPPRGGYGM
Sb027312_Sorbi1 -VSPRGGYGL
BoxShade v3.31 C (beta, 970507) Output
AT5G04840.1     - - - - - - - - - - - - - - - - - - - - M S R P A P L P P R C P I P K K L S L S P V A D T F Y S S S S P I E S Y I G Q Y
Os008181_Os02t0    - - - - - - - - - - - - - - - - - - - - M S R S P H L P P R C P - P L G P Q I T R R D D S L F T Q S C R F P S - - - - -
Sb027312_Sorbi1    L L I S R A K R G R P S K I R G L V L A M S R S P H L P P R C P - P L G P Q I T R R D D S M F T Q S C R F P S - - - - -
 
AT5G04840.1     K S S T Q D S R L E D Q P A W L D E L L C D K T D G L L T R G G P L R R S A S D S V V L L G D I S A T F S - - - - - - -
Os008181_Os02t0    - - - - E D P F V G E P P C W L D D L L A D S - - G K S H T L P P L R R A C S D S D A I L - D V L T S F Q S P I Y P I D
Sb027312_Sorbi1    - - - - G D P F F G E P P C W L D D L L A D S - - G K A P K L P P L R R A C S D S D A I L - D A L S T F Q S P I Y P I E
 
AT5G04840.1     - G F D Q S E D E - - E S L S S E A C G D - - - - - L E S A C V Y G P N S P R A K N N S S F S N N P I A S A F S D Y G S
Os008181_Os02t0    E G D P Q P V G E A G E S F N A A A E G G G S G A G I E G S C V Y G P N S P R Q K T R L T S S E S S M V N A V L E N V P
Sb027312_Sorbi1    E G D L N S G G E - G E D L L D A G E G G E S G S V V E A C C V Y G P N S P R Q K S R L T S S E S S M V N A V L E N V P
 
AT5G04840.1     Q T P P Q N L D - D T V K G I N R S P V A E N A C G S M G I P - - - - - - - - - - N A K R N P G Q R S R V R K L Q Y I A
Os008181_Os02t0    S N P L Q Y L M I D A T S G V N C N V G A A N G T G D T G D A - - V C H A D Q E K S L K R R S G Q R S R V R K L Q Y I A
Sb027312_Sorbi1    S N P L Q Y L T I D A S S G V N G N V - - A S G T A D A S D A F G F G H P D Q D K S F K R R S G Q R S R V R K L Q Y I A
 
AT5G04840.1     E L E R T V G M L Q T V E A D L S V R V A S L L Q T R A T L S L E N S Q L K Q Q M A I L K Q D K L I R E G E Y Q L L K K
Os008181_Os02t0    D L E R T V D S L Q N I G A D L A V R V A S L F Q L R N A L S M E N K Q L R R Q I T S L Q Q A K L I K D G Q T Q M L K K
Sb027312_Sorbi1    E L E R T V D S L Q N M G A D L A V R V S S L F Q L H S A L S M E N K Q L R M Q I S S L Q H A K L I K D G Q T Q A L K N
 
AT5G04840.1     E A Q R L K S G L G Y L G S T N N S N R L V R S Y S A G S N V A P R T A - - - - S S H L D W N L L D L T K L N L N - - -
Os008181_Os02t0    E T E R L K - - - - - - - - - Q L S V R H R R S R S V T S C F E A N S F G G G D P S A I N W Q M L D M S K L S L N G G A
Sb027312_Sorbi1    E A E R L K - - - - - - - - - Q M S A R H R R S R S V T S C Y D P T S F - G A D A S A V N W Q M P D M G R L S L N G S S
 
AT5G04840.1     - - - - - - - - - -
Os008181_Os02t0    V V P P R G G Y G M
Sb027312_Sorbi1    - V S P R G G Y G L
 
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