Input
| Putative repression domain
|
|
AT5G04840.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt042957 |
not found in 293aa |
AT5G04840.1 |
1st_1st |
0.430476190 |
Ia |
Pt035559 |
not found in 294aa |
AT5G04840.1 |
not_1st |
0.420952380 |
II |
Pt035558 |
not found in 294aa |
AT5G04840.1 |
not_1st |
0.420952380 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT5G04840.1 MSRPAPLPPRCPIPKKLSLSPVADTFYSSSSPIESYIGQYKSSTQDSRLEDQPAWLDELL
pt035558_POPTR_ MSRQSLLPPRCPFQKPVVSRPIHD----------SYPQHHRSPSQGSILGEKPAWLDDLL
pt035559_POPTR_ MSRQSLLPPRCPFQKPVVSRPIHD----------SYPQHHRSPSQGSILGEKPAWLDDLL
pt042957_POPTR_ MSRQSLLPPRCPFRKHVVSHPIHE----------SSPQHHRSPSQGSVLEEKPAWLDDLL
*** : ******: * : *: : * :::*.:*.* * ::*****:**
AT5G04840.1 CDKTDGLLTRGGPLRRSASDSVVLLGDISATFSGFDQSEDE-ESLSSEACGDLESACVYG
pt035558_POPTR_ SDEDAD--SRGTCLRRSASDSVTLLEGIVDSFSGSSPYNNEAASGGGETCSGLESASMYG
pt035559_POPTR_ SDEDAD--SRGTCLRRSASDSVTLLEGIVDSFSGSSPYNNEAASGGGETCSGLESASMYG
pt042957_POPTR_ SDEDAD--SKGKCLRRSASDSVTLLDGIVDSFSGLSPYNDEAASGGNETCSGLESASMYG
.*: . ::* *********.** .* :*** . ::* * ..*:*..****.:**
AT5G04840.1 PNSPRAKNNSSFSNNPIASAFSDYGSQTPPQNLDDTVKGINRSPVAE--NACGSMGIPNA
pt035558_POPTR_ PNSPRRRGNVTFSENAIASALSEYAFQNPLQYVDGSLCIWGNTPLDSMGNACGSAGELNG
pt035559_POPTR_ PNSPRRRGNVTFSENAIASALSEYAFQNPLQYVDGSLCIWGNTPLDSMGNACGSAGELNG
pt042957_POPTR_ PNSPRRRGNVTFSENAIASALSEYAFQNPLQYVDGSLCISGIKPLDQMGNACGSAGELNG
***** :.* :**:*.****:*:*. *.* * :*.:: . .*: . ***** * *.
AT5G04840.1 -----KRNPGQRSRVRKLQYIAELERTVGMLQTVEADLSVRVASLLQTRATLSLENSQLK
pt035558_POPTR_ ETSTVKRQSGQRSRVRKLQYIAELERTVNVLQTLESELAFKVASMLQKRAALSLENNTLK
pt035559_POPTR_ ETSTVKRQSGQRSRVRKLQYIAELERTVNVLQTLESELAFKVASMLQKRAALSLENNTLK
pt042957_POPTR_ ETNPVKRHSGQRSRVRKLQYIAELERTVNVLQTLESELAVKVASMLQKRATLSLENNTLK
**:.*******************.:***:*::*:.:***:**.**:*****. **
AT5G04840.1 QQMAILKQDKLIREGEYQLLKKEAQRLKSGLGYLGSTNNSNRLVRSYSAGSNVAPRTASS
pt035558_POPTR_ QQVARLRQEKLIVDAQHKTLKKEAERLKNKLG--SSTNNK---FRTYSR-SSLSPEAARS
pt035559_POPTR_ QQVARLRQEKLIVDAQHKTLKKEAERLKNKLG--SSTNNK---FRTYSR-SSLSPEAARS
pt042957_POPTR_ QQEARIRQEKLIAEAQHKALKKEAERMKNKLG---FTNLK---FRNYSR-SSRPPEAARS
** * ::*:*** :.::: *****:*:*. ** ** . .*.** *. .*.:* *
AT5G04840.1 HLDWNLLDLTKLNLN
pt035558_POPTR_ EVTWQ---MARLNLN
pt035559_POPTR_ EVTWQ---MARLNLN
pt042957_POPTR_ EVTWQ---MAKLNLN
.: *: :::****
BoxShade v3.31 C (beta, 970507) Output
AT5G04840.1 |
M |
S |
R |
P |
A |
P |
L |
P |
P |
R |
C |
P |
I |
P |
K |
K |
L |
S |
L |
S |
P |
V |
A |
D |
T |
F |
Y |
S |
S |
S |
S |
P |
I |
E |
S |
Y |
I |
G |
Q |
Y |
K |
S |
S |
T |
Q |
D |
S |
R |
L |
E |
D |
Q |
P |
A |
W |
L |
D |
E |
L |
L |
pt035558_POPTR_ |
M |
S |
R |
Q |
S |
L |
L |
P |
P |
R |
C |
P |
F |
Q |
K |
P |
V |
V |
S |
R |
P |
I |
H |
D |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
Y |
P |
Q |
H |
H |
R |
S |
P |
S |
Q |
G |
S |
I |
L |
G |
E |
K |
P |
A |
W |
L |
D |
D |
L |
L |
pt035559_POPTR_ |
M |
S |
R |
Q |
S |
L |
L |
P |
P |
R |
C |
P |
F |
Q |
K |
P |
V |
V |
S |
R |
P |
I |
H |
D |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
Y |
P |
Q |
H |
H |
R |
S |
P |
S |
Q |
G |
S |
I |
L |
G |
E |
K |
P |
A |
W |
L |
D |
D |
L |
L |
pt042957_POPTR_ |
M |
S |
R |
Q |
S |
L |
L |
P |
P |
R |
C |
P |
F |
R |
K |
H |
V |
V |
S |
H |
P |
I |
H |
E |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
S |
S |
P |
Q |
H |
H |
R |
S |
P |
S |
Q |
G |
S |
V |
L |
E |
E |
K |
P |
A |
W |
L |
D |
D |
L |
L |
|
AT5G04840.1 |
C |
D |
K |
T |
D |
G |
L |
L |
T |
R |
G |
G |
P |
L |
R |
R |
S |
A |
S |
D |
S |
V |
V |
L |
L |
G |
D |
I |
S |
A |
T |
F |
S |
G |
F |
D |
Q |
S |
E |
D |
E |
- |
E |
S |
L |
S |
S |
E |
A |
C |
G |
D |
L |
E |
S |
A |
C |
V |
Y |
G |
pt035558_POPTR_ |
S |
D |
E |
D |
A |
D |
- |
- |
S |
R |
G |
T |
C |
L |
R |
R |
S |
A |
S |
D |
S |
V |
T |
L |
L |
E |
G |
I |
V |
D |
S |
F |
S |
G |
S |
S |
P |
Y |
N |
N |
E |
A |
A |
S |
G |
G |
G |
E |
T |
C |
S |
G |
L |
E |
S |
A |
S |
M |
Y |
G |
pt035559_POPTR_ |
S |
D |
E |
D |
A |
D |
- |
- |
S |
R |
G |
T |
C |
L |
R |
R |
S |
A |
S |
D |
S |
V |
T |
L |
L |
E |
G |
I |
V |
D |
S |
F |
S |
G |
S |
S |
P |
Y |
N |
N |
E |
A |
A |
S |
G |
G |
G |
E |
T |
C |
S |
G |
L |
E |
S |
A |
S |
M |
Y |
G |
pt042957_POPTR_ |
S |
D |
E |
D |
A |
D |
- |
- |
S |
K |
G |
K |
C |
L |
R |
R |
S |
A |
S |
D |
S |
V |
T |
L |
L |
D |
G |
I |
V |
D |
S |
F |
S |
G |
L |
S |
P |
Y |
N |
D |
E |
A |
A |
S |
G |
G |
N |
E |
T |
C |
S |
G |
L |
E |
S |
A |
S |
M |
Y |
G |
|
AT5G04840.1 |
P |
N |
S |
P |
R |
A |
K |
N |
N |
S |
S |
F |
S |
N |
N |
P |
I |
A |
S |
A |
F |
S |
D |
Y |
G |
S |
Q |
T |
P |
P |
Q |
N |
L |
D |
D |
T |
V |
K |
G |
I |
N |
R |
S |
P |
V |
A |
E |
- |
- |
N |
A |
C |
G |
S |
M |
G |
I |
P |
N |
A |
pt035558_POPTR_ |
P |
N |
S |
P |
R |
R |
R |
G |
N |
V |
T |
F |
S |
E |
N |
A |
I |
A |
S |
A |
L |
S |
E |
Y |
A |
F |
Q |
N |
P |
L |
Q |
Y |
V |
D |
G |
S |
L |
C |
I |
W |
G |
N |
T |
P |
L |
D |
S |
M |
G |
N |
A |
C |
G |
S |
A |
G |
E |
L |
N |
G |
pt035559_POPTR_ |
P |
N |
S |
P |
R |
R |
R |
G |
N |
V |
T |
F |
S |
E |
N |
A |
I |
A |
S |
A |
L |
S |
E |
Y |
A |
F |
Q |
N |
P |
L |
Q |
Y |
V |
D |
G |
S |
L |
C |
I |
W |
G |
N |
T |
P |
L |
D |
S |
M |
G |
N |
A |
C |
G |
S |
A |
G |
E |
L |
N |
G |
pt042957_POPTR_ |
P |
N |
S |
P |
R |
R |
R |
G |
N |
V |
T |
F |
S |
E |
N |
A |
I |
A |
S |
A |
L |
S |
E |
Y |
A |
F |
Q |
N |
P |
L |
Q |
Y |
V |
D |
G |
S |
L |
C |
I |
S |
G |
I |
K |
P |
L |
D |
Q |
M |
G |
N |
A |
C |
G |
S |
A |
G |
E |
L |
N |
G |
|
AT5G04840.1 |
- |
- |
- |
- |
- |
K |
R |
N |
P |
G |
Q |
R |
S |
R |
V |
R |
K |
L |
Q |
Y |
I |
A |
E |
L |
E |
R |
T |
V |
G |
M |
L |
Q |
T |
V |
E |
A |
D |
L |
S |
V |
R |
V |
A |
S |
L |
L |
Q |
T |
R |
A |
T |
L |
S |
L |
E |
N |
S |
Q |
L |
K |
pt035558_POPTR_ |
E |
T |
S |
T |
V |
K |
R |
Q |
S |
G |
Q |
R |
S |
R |
V |
R |
K |
L |
Q |
Y |
I |
A |
E |
L |
E |
R |
T |
V |
N |
V |
L |
Q |
T |
L |
E |
S |
E |
L |
A |
F |
K |
V |
A |
S |
M |
L |
Q |
K |
R |
A |
A |
L |
S |
L |
E |
N |
N |
T |
L |
K |
pt035559_POPTR_ |
E |
T |
S |
T |
V |
K |
R |
Q |
S |
G |
Q |
R |
S |
R |
V |
R |
K |
L |
Q |
Y |
I |
A |
E |
L |
E |
R |
T |
V |
N |
V |
L |
Q |
T |
L |
E |
S |
E |
L |
A |
F |
K |
V |
A |
S |
M |
L |
Q |
K |
R |
A |
A |
L |
S |
L |
E |
N |
N |
T |
L |
K |
pt042957_POPTR_ |
E |
T |
N |
P |
V |
K |
R |
H |
S |
G |
Q |
R |
S |
R |
V |
R |
K |
L |
Q |
Y |
I |
A |
E |
L |
E |
R |
T |
V |
N |
V |
L |
Q |
T |
L |
E |
S |
E |
L |
A |
V |
K |
V |
A |
S |
M |
L |
Q |
K |
R |
A |
T |
L |
S |
L |
E |
N |
N |
T |
L |
K |
|
AT5G04840.1 |
Q |
Q |
M |
A |
I |
L |
K |
Q |
D |
K |
L |
I |
R |
E |
G |
E |
Y |
Q |
L |
L |
K |
K |
E |
A |
Q |
R |
L |
K |
S |
G |
L |
G |
Y |
L |
G |
S |
T |
N |
N |
S |
N |
R |
L |
V |
R |
S |
Y |
S |
A |
G |
S |
N |
V |
A |
P |
R |
T |
A |
S |
S |
pt035558_POPTR_ |
Q |
Q |
V |
A |
R |
L |
R |
Q |
E |
K |
L |
I |
V |
D |
A |
Q |
H |
K |
T |
L |
K |
K |
E |
A |
E |
R |
L |
K |
N |
K |
L |
G |
- |
- |
S |
S |
T |
N |
N |
K |
- |
- |
- |
F |
R |
T |
Y |
S |
R |
- |
S |
S |
L |
S |
P |
E |
A |
A |
R |
S |
pt035559_POPTR_ |
Q |
Q |
V |
A |
R |
L |
R |
Q |
E |
K |
L |
I |
V |
D |
A |
Q |
H |
K |
T |
L |
K |
K |
E |
A |
E |
R |
L |
K |
N |
K |
L |
G |
- |
- |
S |
S |
T |
N |
N |
K |
- |
- |
- |
F |
R |
T |
Y |
S |
R |
- |
S |
S |
L |
S |
P |
E |
A |
A |
R |
S |
pt042957_POPTR_ |
Q |
Q |
E |
A |
R |
I |
R |
Q |
E |
K |
L |
I |
A |
E |
A |
Q |
H |
K |
A |
L |
K |
K |
E |
A |
E |
R |
M |
K |
N |
K |
L |
G |
- |
- |
- |
F |
T |
N |
L |
K |
- |
- |
- |
F |
R |
N |
Y |
S |
R |
- |
S |
S |
R |
P |
P |
E |
A |
A |
R |
S |
|
AT5G04840.1 |
H |
L |
D |
W |
N |
L |
L |
D |
L |
T |
K |
L |
N |
L |
N |
pt035558_POPTR_ |
E |
V |
T |
W |
Q |
- |
- |
- |
M |
A |
R |
L |
N |
L |
N |
pt035559_POPTR_ |
E |
V |
T |
W |
Q |
- |
- |
- |
M |
A |
R |
L |
N |
L |
N |
pt042957_POPTR_ |
E |
V |
T |
W |
Q |
- |
- |
- |
M |
A |
K |
L |
N |
L |
N |
|
|