fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os008181 not found in 326aa AT5G04840.1 1st_1st 0.302857142 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04840.1     MSRPAPLPPRCPIPKKLSLSPVADTFYSSSSPIESYIGQYKSSTQDSRLEDQPAWLDELL
Os008181_Os02t0 MSRSPHLPPRCP-PLGPQITRRDDSLFTQSCRFPS---------EDPFVGEPPCWLDDLL
                ***.. ****** *   .::   *::::.*. : *         :*. : : *.***:**

AT5G04840.1     CD--KTDGLLTRGGPLRRSASDSVVLLGDISATFSG----FDQSEDE------ESLSSEA
Os008181_Os02t0 ADSGKSHTL----PPLRRACSDSDAIL-DVLTSFQSPIYPIDEGDPQPVGEAGESFNAAA
                .*  *:. *     ****:.*** .:* *: ::*..    :*:.: :      **:.: *

AT5G04840.1     CG-----DLESACVYGPNSPRAKNNSSFSNNPIASAFSDYGSQTPPQNLD-DTVKGINRS
Os008181_Os02t0 EGGGSGAGIEGSCVYGPNSPRQKTRLTSSESSMVNAVLENVPSNPLQYLMIDATSGVNCN
                 *     .:*.:********* *.. : *:..:..*. :  ...* * *  *:..*:* .

AT5G04840.1     PVAENACGSMGIP--------NAKRNPGQRSRVRKLQYIAELERTVGMLQTVEADLSVRV
Os008181_Os02t0 VGAANGTGDTGDAVCHADQEKSLKRRSGQRSRVRKLQYIADLERTVDSLQNIGADLAVRV
                  * *. *. * .        . **..*************:*****. **.: ***:***

AT5G04840.1     ASLLQTRATLSLENSQLKQQMAILKQDKLIREGEYQLLKKEAQRLKSGLGYLGSTNNSNR
Os008181_Os02t0 ASLFQLRNALSMENKQLRRQITSLQQAKLIKDGQTQMLKKETERLKQ----LSVRHRRSR
                ***:* * :**:**.**::*:: *:* ***::*: *:****::***.    *.  :. .*

AT5G04840.1     LV------RSYSAGSNVAPRTASSHLDWNLLDLTKLNLN-------------
Os008181_Os02t0 SVTSCFEANSFGGGD-------PSAINWQMLDMSKLSLNGGAVVPPRGGYGM
                 *      .*:..*.       .* ::*::**::**.**
BoxShade v3.31 C (beta, 970507) Output
AT5G04840.1     M S R P A P L P P R C P I P K K L S L S P V A D T F Y S S S S P I E S Y I G Q Y K S S T Q D S R L E D Q P A W L D E L L
Os008181_Os02t0    M S R S P H L P P R C P - P L G P Q I T R R D D S L F T Q S C R F P S - - - - - - - - - E D P F V G E P P C W L D D L L
 
AT5G04840.1     C D - - K T D G L L T R G G P L R R S A S D S V V L L G D I S A T F S G - - - - F D Q S E D E - - - - - - E S L S S E A
Os008181_Os02t0    A D S G K S H T L - - - - P P L R R A C S D S D A I L - D V L T S F Q S P I Y P I D E G D P Q P V G E A G E S F N A A A
 
AT5G04840.1     C G - - - - - D L E S A C V Y G P N S P R A K N N S S F S N N P I A S A F S D Y G S Q T P P Q N L D - D T V K G I N R S
Os008181_Os02t0    E G G G S G A G I E G S C V Y G P N S P R Q K T R L T S S E S S M V N A V L E N V P S N P L Q Y L M I D A T S G V N C N
 
AT5G04840.1     P V A E N A C G S M G I P - - - - - - - - N A K R N P G Q R S R V R K L Q Y I A E L E R T V G M L Q T V E A D L S V R V
Os008181_Os02t0    V G A A N G T G D T G D A V C H A D Q E K S L K R R S G Q R S R V R K L Q Y I A D L E R T V D S L Q N I G A D L A V R V
 
AT5G04840.1     A S L L Q T R A T L S L E N S Q L K Q Q M A I L K Q D K L I R E G E Y Q L L K K E A Q R L K S G L G Y L G S T N N S N R
Os008181_Os02t0    A S L F Q L R N A L S M E N K Q L R R Q I T S L Q Q A K L I K D G Q T Q M L K K E T E R L K Q - - - - L S V R H R R S R
 
AT5G04840.1     L V - - - - - - R S Y S A G S N V A P R T A S S H L D W N L L D L T K L N L N - - - - - - - - - - - - -
Os008181_Os02t0    S V T S C F E A N S F G G G D - - - - - - - P S A I N W Q M L D M S K L S L N G G A V V P P R G G Y G M
 
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