fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G04840.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027312 not found in 372aa AT5G04840.1 1st_1st 0.28 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G04840.1     --------------------MSRPAPLPPRCPIPKKLSLSPVADTFYSSSSPIESYIGQY
Sb027312_Sorbi1 LLISRAKRGRPSKIRGLVLAMSRSPHLPPRCP-PLGPQITRRDDSMFTQSCRFPS-----
                                    ***.. ****** *   .::   *::::.*. : *     

AT5G04840.1     KSSTQDSRLEDQPAWLDELLCDKTDGLLTRGGPLRRSASDSVVLL---------------
Sb027312_Sorbi1 ----GDPFFGEPPCWLDDLLADS--GKAPKLPPLRRACSDSDAILDALSTFQSPIYPIEE
                     *. : : *.***:**.*.  *  .:  ****:.*** .:*               

AT5G04840.1     GDISATFSG---FDQSEDEESLS-SEACGDLESACVYGPNSPRAKNNSSFSNNPIASAFS
Sb027312_Sorbi1 GDLNSGGEGEDLLDAGEGGESGSVVEAC------CVYGPNSPRQKSRLTSSESSMVNAVL
                **:.:  .*   :* .*. ** *  ***      ********* *.. : *:..:..*. 

AT5G04840.1     DYGSQTPPQNLD-DTVKGINRSPVAENACGS----MGIPNA----KRNPGQRSRVRKLQY
Sb027312_Sorbi1 ENVPSNPLQYLTIDASSGVNGNVASGTADASDAFGFGHPDQDKSFKRRSGQRSRVRKLQY
                :  ...* * *  *: .*:* . .: .* .*    :* *:     **..***********

AT5G04840.1     IAELERTVGMLQTVEADLSVRVASLLQTRATLSLENSQLKQQMAILKQDKLIREGEYQLL
Sb027312_Sorbi1 IAELERTVDSLQNMGADLAVRVSSLFQLHSALSMENKQLRMQISSLQHAKLIKDGQTQAL
                ********. **.: ***:***:**:* :::**:**.**: *:: *:: ***::*: * *

AT5G04840.1     KKEAQRLKSGLGYLGSTNNSNRLVRSYSAGSNVAPRT---ASSHLDWNLLDLTKLNLN--
Sb027312_Sorbi1 KNEAERLK---------QMSARHRRSRSVTSCYDPTSFGADASAVNWQMPDMGRLSLNGS
                *:**:***         : * *  ** *. *   * :    :* ::*:: *: :*.**  

AT5G04840.1     ----------
Sb027312_Sorbi1 SVSPRGGYGL
BoxShade v3.31 C (beta, 970507) Output
AT5G04840.1     - - - - - - - - - - - - - - - - - - - - M S R P A P L P P R C P I P K K L S L S P V A D T F Y S S S S P I E S Y I G Q Y
Sb027312_Sorbi1    L L I S R A K R G R P S K I R G L V L A M S R S P H L P P R C P - P L G P Q I T R R D D S M F T Q S C R F P S - - - - -
 
AT5G04840.1     K S S T Q D S R L E D Q P A W L D E L L C D K T D G L L T R G G P L R R S A S D S V V L L - - - - - - - - - - - - - - -
Sb027312_Sorbi1    - - - - G D P F F G E P P C W L D D L L A D S - - G K A P K L P P L R R A C S D S D A I L D A L S T F Q S P I Y P I E E
 
AT5G04840.1     G D I S A T F S G - - - F D Q S E D E E S L S - S E A C G D L E S A C V Y G P N S P R A K N N S S F S N N P I A S A F S
Sb027312_Sorbi1    G D L N S G G E G E D L L D A G E G G E S G S V V E A C - - - - - - C V Y G P N S P R Q K S R L T S S E S S M V N A V L
 
AT5G04840.1     D Y G S Q T P P Q N L D - D T V K G I N R S P V A E N A C G S - - - - M G I P N A - - - - K R N P G Q R S R V R K L Q Y
Sb027312_Sorbi1    E N V P S N P L Q Y L T I D A S S G V N G N V A S G T A D A S D A F G F G H P D Q D K S F K R R S G Q R S R V R K L Q Y
 
AT5G04840.1     I A E L E R T V G M L Q T V E A D L S V R V A S L L Q T R A T L S L E N S Q L K Q Q M A I L K Q D K L I R E G E Y Q L L
Sb027312_Sorbi1    I A E L E R T V D S L Q N M G A D L A V R V S S L F Q L H S A L S M E N K Q L R M Q I S S L Q H A K L I K D G Q T Q A L
 
AT5G04840.1     K K E A Q R L K S G L G Y L G S T N N S N R L V R S Y S A G S N V A P R T - - - A S S H L D W N L L D L T K L N L N - -
Sb027312_Sorbi1    K N E A E R L K - - - - - - - - - Q M S A R H R R S R S V T S C Y D P T S F G A D A S A V N W Q M P D M G R L S L N G S
 
AT5G04840.1     - - - - - - - - - -
Sb027312_Sorbi1    S V S P R G G Y G L
 
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