fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G05090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051924 not found in 312aa AT3G10760.1 1st_not 0.502262443 II
Pt044250 not found in 323aa AT3G10760.1 1st_not 0.513574660 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G05090.1     MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDLHRNNNSNS----------GQ
pt044250_POPTR_ MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDITNPTNTTNTNNHNSSLHQNQ
gm051924_Glyma1 MREDDSNWFSRWEEELPSPEELMPLSQTLITPDLAMAFDIRNPHTSNTAQNQHHHHHQNQ
                ***:*****::******* ***:****:*******:***: .  .:..          .*

AT5G05090.1     PLPQT-TPP--------------------------QPNS------SAEIAGDSTGDEPAR
pt044250_POPTR_ PLPPPPPPPAAVSPTPTNPLASP------------QPNSGDFATDSGELGSGAGGDEPAR
gm051924_Glyma1 ------QPPQLQQPSNPSSLPNPQQQQQQQQQQQQQPTSAEFA-DSGELGSGTAGEEPAR
                       **                          **.*      *.*:...: *:****

AT5G05090.1     TLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLK
pt044250_POPTR_ TLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLYLK
gm051924_Glyma1 TLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLK
                **************************************.*********************

AT5G05090.1     RMK---SGGGGGGSGDS--------------DHLFASSPVPPHFLHPTSRQSSDLFIPSF
pt044250_POPTR_ RMQGLSSGGGGPGNGAVGGGGGLTGGSDAATDHLFASSPVPAHFLHP-GRPNSDHFLP-F
gm051924_Glyma1 RMQGISAAGPGGASGAV---------ADPATDHLFASSPVPAHFLHPAARPNSDHFLP-F
                **:   :.* * ..*                **********.***** .* .** *:* *

AT5G05090.1     VPI-----STQQQHIAAPPS---------QFLHRQISAVNFTSPTKATDQAMFLARQQSE
pt044250_POPTR_ VPVAALQQHHHQQQMAAAAAAVGHPQLQGQY-HRPMG--HFGSPTNGQFEHPFLARQT--
gm051924_Glyma1 VP--ALHHHQQQQQMAAAA----------QY-HRQVG--HFGSPPNGHFENPFMSRPN--
                **        :**::**..          *: ** :.  :* **.:.  :  *::*    

AT5G05090.1     LQQPVFKPSS-LHL-HSQVANYTQDLKSGA-----KTVLTLFPTRDD
pt044250_POPTR_ -QQPVHRMGAPVHN---AVPGYVEDLESAN-GNEGRKVLTLFPTGDD
gm051924_Glyma1 -LQRMGGGGGPVHNNHHPVSGYVEDMESANAASGGRKVLTLFPTGDD
                  * :   .. :*     *..*.:*::*.      :.******* **
BoxShade v3.31 C (beta, 970507) Output
AT5G05090.1     M R E E D S N W F A K W E E E L P S P E E L I P L S Q S L I T P D L A I A F D L H R N N N S N S - - - - - - - - - - G Q
pt044250_POPTR_    M R E D D S N W F S R W E E E L P S L E E L M P L S Q T L I T P D L A L A F D I T N P T N T T N T N N H N S S L H Q N Q
gm051924_Glyma1    M R E D D S N W F S R W E E E L P S P E E L M P L S Q T L I T P D L A M A F D I R N P H T S N T A Q N Q H H H H H Q N Q
 
AT5G05090.1     P L P Q T - T P P - - - - - - - - - - - - - - - - - - - - - - - - - - Q P N S - - - - - - S A E I A G D S T G D E P A R
pt044250_POPTR_    P L P P P P P P P A A V S P T P T N P L A S P - - - - - - - - - - - - Q P N S G D F A T D S G E L G S G A G G D E P A R
gm051924_Glyma1    - - - - - - Q P P Q L Q Q P S N P S S L P N P Q Q Q Q Q Q Q Q Q Q Q Q Q P T S A E F A - D S G E L G S G T A G E E P A R
 
AT5G05090.1     T L K R P R L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R L Y L K
pt044250_POPTR_    T L K R P R L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M N V D G L T R E N V A S H L Q K Y R L Y L K
gm051924_Glyma1    T L K R P R L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R L Y L K
 
AT5G05090.1     R M K - - - S G G G G G G S G D S - - - - - - - - - - - - - - D H L F A S S P V P P H F L H P T S R Q S S D L F I P S F
pt044250_POPTR_    R M Q G L S S G G G G P G N G A V G G G G G L T G G S D A A T D H L F A S S P V P A H F L H P - G R P N S D H F L P - F
gm051924_Glyma1    R M Q G I S A A G P G G A S G A V - - - - - - - - - A D P A T D H L F A S S P V P A H F L H P A A R P N S D H F L P - F
 
AT5G05090.1     V P I - - - - - S T Q Q Q H I A A P P S - - - - - - - - - Q F L H R Q I S A V N F T S P T K A T D Q A M F L A R Q Q S E
pt044250_POPTR_    V P V A A L Q Q H H H Q Q Q M A A A A A A V G H P Q L Q G Q Y - H R P M G - - H F G S P T N G Q F E H P F L A R Q T - -
gm051924_Glyma1    V P - - A L H H H Q Q Q Q Q M A A A A - - - - - - - - - - Q Y - H R Q V G - - H F G S P P N G H F E N P F M S R P N - -
 
AT5G05090.1     L Q Q P V F K P S S - L H L - H S Q V A N Y T Q D L K S G A - - - - - K T V L T L F P T R D D
pt044250_POPTR_    - Q Q P V H R M G A P V H N - - - A V P G Y V E D L E S A N - G N E G R K V L T L F P T G D D
gm051924_Glyma1    - L Q R M G G G G G P V H N N H H P V S G Y V E D M E S A N A A S G G R K V L T L F P T G D D
 
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