fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G05090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt044250 not found in 323aa AT3G10760.1 1st_not 0.513574660 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G05090.1     MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDL------HRNNNSNSG----Q
pt044250_POPTR_ MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDITNPTNTTNTNNHNSSLHQNQ
                ***:*****::******* ***:****:*******:***:       ..** **.    *

AT5G05090.1     PLPQTTP---------------PQPNS------SAEIAGDSTGDEPARTLKRPRLVWTPQ
pt044250_POPTR_ PLPPPPPPPAAVSPTPTNPLASPQPNSGDFATDSGELGSGAGGDEPARTLKRPRLVWTPQ
                *** ..*               *****      *.*:...: ******************

AT5G05090.1     LHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMK---SGGGGG
pt044250_POPTR_ LHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLYLKRMQGLSSGGGGP
                **************************.***********************:   ***** 

AT5G05090.1     GSG--------------DSDHLFASSPVPPHFLHPTSRQSSDLFIPSFVPISTQQQH---
pt044250_POPTR_ GNGAVGGGGGLTGGSDAATDHLFASSPVPAHFLHP-GRPNSDHFLP-FVPVAALQQHHHQ
                *.*               :**********.***** .* .** *:* ***::: ***   

AT5G05090.1     --IAAPPSQFLHRQISAV------NFTSPTKATDQAMFLARQQSELQQPVFKPSSLHLHS
pt044250_POPTR_ QQMAAAAAAVGHPQLQGQYHRPMGHFGSPTNGQFEHPFLARQT---QQPVHRMGA-PVHN
                  :**..: . * *:..       :* ***:.  :  *****    ****.: .:  :*.

AT5G05090.1     QVANYTQDLKSG----AKTVLTLFPTRDD
pt044250_POPTR_ AVPGYVEDLESANGNEGRKVLTLFPTGDD
                 *..*.:**:*.    .:.******* **
BoxShade v3.31 C (beta, 970507) Output
AT5G05090.1     M R E E D S N W F A K W E E E L P S P E E L I P L S Q S L I T P D L A I A F D L - - - - - - H R N N N S N S G - - - - Q
pt044250_POPTR_    M R E D D S N W F S R W E E E L P S L E E L M P L S Q T L I T P D L A L A F D I T N P T N T T N T N N H N S S L H Q N Q
 
AT5G05090.1     P L P Q T T P - - - - - - - - - - - - - - - P Q P N S - - - - - - S A E I A G D S T G D E P A R T L K R P R L V W T P Q
pt044250_POPTR_    P L P P P P P P P A A V S P T P T N P L A S P Q P N S G D F A T D S G E L G S G A G G D E P A R T L K R P R L V W T P Q
 
AT5G05090.1     L H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R L Y L K R M K - - - S G G G G G
pt044250_POPTR_    L H K R F V D A V A H L G I K N A V P K T I M Q L M N V D G L T R E N V A S H L Q K Y R L Y L K R M Q G L S S G G G G P
 
AT5G05090.1     G S G - - - - - - - - - - - - - - D S D H L F A S S P V P P H F L H P T S R Q S S D L F I P S F V P I S T Q Q Q H - - -
pt044250_POPTR_    G N G A V G G G G G L T G G S D A A T D H L F A S S P V P A H F L H P - G R P N S D H F L P - F V P V A A L Q Q H H H Q
 
AT5G05090.1     - - I A A P P S Q F L H R Q I S A V - - - - - - N F T S P T K A T D Q A M F L A R Q Q S E L Q Q P V F K P S S L H L H S
pt044250_POPTR_    Q Q M A A A A A A V G H P Q L Q G Q Y H R P M G H F G S P T N G Q F E H P F L A R Q T - - - Q Q P V H R M G A - P V H N
 
AT5G05090.1     Q V A N Y T Q D L K S G - - - - A K T V L T L F P T R D D
pt044250_POPTR_    A V P G Y V E D L E S A N G N E G R K V L T L F P T G D D
 
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