fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G05090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005816 not found in 318aa AT3G10760.1 not_not 0.495475113 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G05090.1     MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDLHR---------NNNSNSG--
pt005816_POPTR_ MREDDSNWFSRWEEELPSLEELMPLSQTLITPDLALAFDITNPSNTTTTTTTNNHNSSLH
                ***:*****::******* ***:****:*******:***: .         .** **.  

AT5G05090.1     --QPLPQTTP---------------PQPNS------SAEIAGDSTGDEPARTLKRPRLVW
pt005816_POPTR_ QNQPLPPPPPPPAAVSPTPTNPLASPQPNSGDFAADSSELGSGAAGDEP-RTLKRPRLVW
                  **** ..*               *****      *:*:...::**** **********

AT5G05090.1     TPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMK---SGG
pt005816_POPTR_ TPQLHKRFVDAVAHLGIKNAVPKTIMQLMNVDGLTRENVASHLQKYRLYLKRMQGLSSGG
                *****************************.***********************:   ***

AT5G05090.1     GGGGSGD-----------SDHLFASSPVPPHFLHPTSRQSSDLFIPSFVPISTQQQH---
pt005816_POPTR_ GGNGTGGGGGLTGGTDAATDHLFASSPVPAHFLHP-GRPNSDHFLP-FVPVAALQNHHHQ
                **.*:*.           :**********.***** .* .** *:* ***::: *:*   

AT5G05090.1     -----IAAP--PSQFLHRQISAVNFTSPTKATDQAMFLARQQSELQQPVFK-----PSSL
pt005816_POPTR_ HQMAAMGHPQLPSQY-HRQMG--HFGSPTNGQFEHPFLPRQT---QQPVHRMGAPVPNT-
                     :. *  ***: ***:.  :* ***:.  :  **.**    ****.:     *.: 

AT5G05090.1     HLHSQVANYTQDLKS----GAKTVLTLFPTRDD
pt005816_POPTR_ -----VPGYVEDLESVNGNGGRKVLTLFPTGDD
                     *..*.:**:*    *.:.******* **
BoxShade v3.31 C (beta, 970507) Output
AT5G05090.1     M R E E D S N W F A K W E E E L P S P E E L I P L S Q S L I T P D L A I A F D L H R - - - - - - - - - N N N S N S G - -
pt005816_POPTR_    M R E D D S N W F S R W E E E L P S L E E L M P L S Q T L I T P D L A L A F D I T N P S N T T T T T T T N N H N S S L H
 
AT5G05090.1     - - Q P L P Q T T P - - - - - - - - - - - - - - - P Q P N S - - - - - - S A E I A G D S T G D E P A R T L K R P R L V W
pt005816_POPTR_    Q N Q P L P P P P P P P A A V S P T P T N P L A S P Q P N S G D F A A D S S E L G S G A A G D E P - R T L K R P R L V W
 
AT5G05090.1     T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R L Y L K R M K - - - S G G
pt005816_POPTR_    T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M N V D G L T R E N V A S H L Q K Y R L Y L K R M Q G L S S G G
 
AT5G05090.1     G G G G S G D - - - - - - - - - - - S D H L F A S S P V P P H F L H P T S R Q S S D L F I P S F V P I S T Q Q Q H - - -
pt005816_POPTR_    G G N G T G G G G G L T G G T D A A T D H L F A S S P V P A H F L H P - G R P N S D H F L P - F V P V A A L Q N H H H Q
 
AT5G05090.1     - - - - - I A A P - - P S Q F L H R Q I S A V N F T S P T K A T D Q A M F L A R Q Q S E L Q Q P V F K - - - - - P S S L
pt005816_POPTR_    H Q M A A M G H P Q L P S Q Y - H R Q M G - - H F G S P T N G Q F E H P F L P R Q T - - - Q Q P V H R M G A P V P N T -
 
AT5G05090.1     H L H S Q V A N Y T Q D L K S - - - - G A K T V L T L F P T R D D
pt005816_POPTR_    - - - - - V P G Y V E D L E S V N G N G G R K V L T L F P T G D D
 
0