fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G05090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm051924 not found in 312aa AT3G10760.1 1st_not 0.502262443 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G05090.1     MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDLHRNNNSNSG-----------
gm051924_Glyma1 MREDDSNWFSRWEEELPSPEELMPLSQTLITPDLAMAFDIRNPHTSNTAQNQHHHHHQNQ
                ***:*****::***********:****:*******:***::. :.**:.           

AT5G05090.1     QPLPQTTPP---------------------QPNS-----SAEIAGDSTGDEPARTLKRPR
gm051924_Glyma1 QP-PQLQQPSNPSSLPNPQQQQQQQQQQQQQPTSAEFADSGELGSGTAGEEPARTLKRPR
                ** **   *                     **.*     *.*:...::*:**********

AT5G05090.1     LVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMK---
gm051924_Glyma1 LVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGIS
                ********************************************************:   

AT5G05090.1     SGGGGGGSG-----DSDHLFASSPVPPHFLHPTSRQSSDLFIPSFVPI---STQQQHIAA
gm051924_Glyma1 AAGPGGASGAVADPATDHLFASSPVPAHFLHPAARPNSDHFLP-FVPALHHHQQQQQMAA
                :.* **.**      :**********.*****::* .** *:* ***      ***::**

AT5G05090.1     PPSQFLHRQISAVNFTSPTKATDQAMFLARQQSELQQ------PVFKPSSLHLHSQVANY
gm051924_Glyma1 -AAQY-HRQVG--HFGSPPNGHFENPFMSR--PNLQRMGGGGGPVHNN-----HHPVSGY
                 .:*: ***:.  :* **.:.  :  *::*  .:**:      **.:      *  *:.*

AT5G05090.1     TQDLK-----SGAKTVLTLFPTRDD
gm051924_Glyma1 VEDMESANAASGGRKVLTLFPTGDD
                .:*::     **.:.******* **
BoxShade v3.31 C (beta, 970507) Output
AT5G05090.1     M R E E D S N W F A K W E E E L P S P E E L I P L S Q S L I T P D L A I A F D L H R N N N S N S G - - - - - - - - - - -
gm051924_Glyma1    M R E D D S N W F S R W E E E L P S P E E L M P L S Q T L I T P D L A M A F D I R N P H T S N T A Q N Q H H H H H Q N Q
 
AT5G05090.1     Q P L P Q T T P P - - - - - - - - - - - - - - - - - - - - - Q P N S - - - - - S A E I A G D S T G D E P A R T L K R P R
gm051924_Glyma1    Q P - P Q L Q Q P S N P S S L P N P Q Q Q Q Q Q Q Q Q Q Q Q Q P T S A E F A D S G E L G S G T A G E E P A R T L K R P R
 
AT5G05090.1     L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R L Y L K R M K - - -
gm051924_Glyma1    L V W T P Q L H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R L Y L K R M Q G I S
 
AT5G05090.1     S G G G G G G S G - - - - - D S D H L F A S S P V P P H F L H P T S R Q S S D L F I P S F V P I - - - S T Q Q Q H I A A
gm051924_Glyma1    A A G P G G A S G A V A D P A T D H L F A S S P V P A H F L H P A A R P N S D H F L P - F V P A L H H H Q Q Q Q Q M A A
 
AT5G05090.1     P P S Q F L H R Q I S A V N F T S P T K A T D Q A M F L A R Q Q S E L Q Q - - - - - - P V F K P S S L H L H S Q V A N Y
gm051924_Glyma1    - A A Q Y - H R Q V G - - H F G S P P N G H F E N P F M S R - - P N L Q R M G G G G G P V H N N - - - - - H H P V S G Y
 
AT5G05090.1     T Q D L K - - - - - S G A K T V L T L F P T R D D
gm051924_Glyma1    V E D M E S A N A A S G G R K V L T L F P T G D D
 
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