fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G05090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm006851 not found in 287aa AT3G10760.1 not_not 0.481900452 III
Gm004219 not found in 260aa AT3G10760.1 not_not 0.434389140 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G05090.1     MREEDSNWFAKWEEELPSPEELIPLSQSLITPDLAIAFDLHRNNNSNSGQ----------
gm004219_Glyma0 MREEDSNWFSSWEEELPPPEELMPLSQTLISHNLAIAFDITNP----SQQQQQQQYSQQG
gm006851_Glyma0 MREEDSNWFSRWEEEFPSPEELMPLSQTLITPDLAMAFDIRNPHTTNTAQQQHHQHQQQP
                *********: ****:*.****:****:**: :**:***: .     : *          

AT5G05090.1     --------------PLPQTTPPQPNSSAEIA-----GDST-GDEPARTLKRPRLVWTPQL
gm004219_Glyma0 QEQEQ-----------QQQFPHQVPDNID-------------EEPARTLKRPRLVWTPQL
gm006851_Glyma0 QQQQQPSNPSSLPNPLQQQQQQQQPTSAEFADSGELGSGTAGEEPARTLKRPRLVWTPQL
                                 *    *   . :             :*****************

AT5G05090.1     HKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMK--SGG--GGG
gm004219_Glyma0 HKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLSAG--GGV
gm006851_Glyma0 HKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGISAAGPGGP
                *************************************************:  *..  ** 

AT5G05090.1     GSGDS--------DHLFASSPVPPHFLHPTSRQSSDLFIPSF-VPIS---TQQQH-----
gm004219_Glyma0 GRVAS---ADPTTDRLFASSPVPPHFLQ---RPGSDHFLPLVSVPAL---QQQQQRHHHQ
gm006851_Glyma0 GGGASGAVADPATDHLFASSPVPAHFLHPAARPNSDHFLPF--VPALHPHQQQQQ-----
                *   *        *:********.***:   * .** *:*   **      ***:     

AT5G05090.1     ---IAAPPSQFLHRQISAVNFTSPTKATDQAMFLARQQSELQQPVFKPSSLHLHSQVANY
gm004219_Glyma0 HLAVAASAAAG-HRQ-----FGLPPNGHFELPILSR----------------MGAPVPGY
gm006851_Glyma0 ----MAAAAQY-HRQVG--HFGSPPNGHFENPFI------------------------GY
                     *..:   ***     *  *.:.  :  ::                        .*

AT5G05090.1     -TQDLK-----SGAKTVLTLFPTRDD
gm004219_Glyma0 AAEDVE-----SGGRKVLTLFPAGDE
gm006851_Glyma0 -VEDMESANAASGGRKVLTLFPTGDD
                 .:*::     **.:.******: *:
BoxShade v3.31 C (beta, 970507) Output
AT5G05090.1     M R E E D S N W F A K W E E E L P S P E E L I P L S Q S L I T P D L A I A F D L H R N N N S N S G Q - - - - - - - - - -
gm004219_Glyma0    M R E E D S N W F S S W E E E L P P P E E L M P L S Q T L I S H N L A I A F D I T N P - - - - S Q Q Q Q Q Q Q Y S Q Q G
gm006851_Glyma0    M R E E D S N W F S R W E E E F P S P E E L M P L S Q T L I T P D L A M A F D I R N P H T T N T A Q Q Q H H Q H Q Q Q P
 
AT5G05090.1     - - - - - - - - - - - - - - P L P Q T T P P Q P N S S A E I A - - - - - G D S T - G D E P A R T L K R P R L V W T P Q L
gm004219_Glyma0    Q E Q E Q - - - - - - - - - - - Q Q Q F P H Q V P D N I D - - - - - - - - - - - - - E E P A R T L K R P R L V W T P Q L
gm006851_Glyma0    Q Q Q Q Q P S N P S S L P N P L Q Q Q Q Q Q Q Q P T S A E F A D S G E L G S G T A G E E P A R T L K R P R L V W T P Q L
 
AT5G05090.1     H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R L Y L K R M K - - S G G - - G G G
gm004219_Glyma0    H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R L Y L K R M Q G L S A G - - G G V
gm006851_Glyma0    H K R F V D A V A H L G I K N A V P K T I M Q L M S V D G L T R E N V A S H L Q K Y R L Y L K R M Q G I S A A G P G G P
 
AT5G05090.1     G S G D S - - - - - - - - D H L F A S S P V P P H F L H P T S R Q S S D L F I P S F - V P I S - - - T Q Q Q H - - - - -
gm004219_Glyma0    G R V A S - - - A D P T T D R L F A S S P V P P H F L Q - - - R P G S D H F L P L V S V P A L - - - Q Q Q Q Q R H H H Q
gm006851_Glyma0    G G G A S G A V A D P A T D H L F A S S P V P A H F L H P A A R P N S D H F L P F - - V P A L H P H Q Q Q Q Q - - - - -
 
AT5G05090.1     - - - I A A P P S Q F L H R Q I S A V N F T S P T K A T D Q A M F L A R Q Q S E L Q Q P V F K P S S L H L H S Q V A N Y
gm004219_Glyma0    H L A V A A S A A A G - H R Q - - - - - F G L P P N G H F E L P I L S R - - - - - - - - - - - - - - - - M G A P V P G Y
gm006851_Glyma0    - - - - M A A A A Q Y - H R Q V G - - H F G S P P N G H F E N P F I - - - - - - - - - - - - - - - - - - - - - - - - G Y
 
AT5G05090.1     - T Q D L K - - - - - S G A K T V L T L F P T R D D
gm004219_Glyma0    A A E D V E - - - - - S G G R K V L T L F P A G D E
gm006851_Glyma0    - V E D M E S A N A A S G G R K V L T L F P T G D D
 
0