fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G05410.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016634 DDDMEDLSLSLSVKRV in 185/214 AT5G05410.1 1st_1st 0.210977701 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G05410.1     --MAVYDQSGDRNRTQIDTSRKRKSRSRGDGT-TVAERLKRWKEYN---ETVEEVSTKKR
gm016634_Glyma0 MHMLV------------------KNHNKGDGSKSLADTLAKWKEYNAWLESNNEAEKPAR
                  * *                  *.:.:***: ::*: * :*****   *: :*...  *

AT5G05410.1     KVPAKGSKKGCMKGKGGPENSRCSFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEA
gm016634_Glyma0 KVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAISA
                ***********************.:****** ************************* .*

AT5G05410.1     ASAYDEAAKAMYGPLARLNFPRSDASEVTSTSSQSEVCTVETPGCVHVKTEDPDCESKPF
gm016634_Glyma0 ALAYDEAARAMYGSCARLNFPNVQVSTLSEESSRN------SPAAANRSRNSPAAS----
                * ******:****. ******. :.* ::. **:.      :*...: . :.* ..    

AT5G05410.1     SGGVEPMYCLENGAEEMKRGVKADKHWLSEFEHNYWSDILKEKEKQKEQGIVETCQQQQQ
gm016634_Glyma0 ----------QSGHALM---------------------ILESSE----------CMI---
                          :.*   *                     **:..*          *     

AT5G05410.1     DSLSVADYGWPNDVDQSHLDSSDMFDVDELLRDLNGDDVFAGLNQDRYPGNSVANGSYRP
gm016634_Glyma0 ---------LPNNSGGDAAEDDDMEDL------------------------SLSLSVKRV
                          **: . .  :..** *:                        *:: .  * 

AT5G05410.1     ESQQSGFDPLQSLNYGIPPFQLEGKDGNGFFDDLSYLDLEN
gm016634_Glyma0 KHE-------------------EGEDESG--TSSSYLSLS-
                : :                   **:* .*   . ***.*.
BoxShade v3.31 C (beta, 970507) Output
AT5G05410.1     - - M A V Y D Q S G D R N R T Q I D T S R K R K S R S R G D G T - T V A E R L K R W K E Y N - - - E T V E E V S T K K R
gm016634_Glyma0    M H M L V - - - - - - - - - - - - - - - - - - K N H N K G D G S K S L A D T L A K W K E Y N A W L E S N N E A E K P A R
 
AT5G05410.1     K V P A K G S K K G C M K G K G G P E N S R C S F R G V R Q R I W G K W V A E I R E P N R G S R L W L G T F P T A Q E A
gm016634_Glyma0    K V P A K G S K K G C M K G K G G P E N S R C N Y R G V R Q R T W G K W V A E I R E P N R G S R L W L G T F P T A I S A
 
AT5G05410.1     A S A Y D E A A K A M Y G P L A R L N F P R S D A S E V T S T S S Q S E V C T V E T P G C V H V K T E D P D C E S K P F
gm016634_Glyma0    A L A Y D E A A R A M Y G S C A R L N F P N V Q V S T L S E E S S R N - - - - - - S P A A A N R S R N S P A A S - - - -
 
AT5G05410.1     S G G V E P M Y C L E N G A E E M K R G V K A D K H W L S E F E H N Y W S D I L K E K E K Q K E Q G I V E T C Q Q Q Q Q
gm016634_Glyma0    - - - - - - - - - - Q S G H A L M - - - - - - - - - - - - - - - - - - - - - I L E S S E - - - - - - - - - - C M I - - -
 
AT5G05410.1     D S L S V A D Y G W P N D V D Q S H L D S S D M F D V D E L L R D L N G D D V F A G L N Q D R Y P G N S V A N G S Y R P
gm016634_Glyma0    - - - - - - - - - L P N N S G G D A A E D D D M E D L - - - - - - - - - - - - - - - - - - - - - - - - S L S L S V K R V
 
AT5G05410.1     E S Q Q S G F D P L Q S L N Y G I P P F Q L E G K D G N G F F D D L S Y L D L E N
gm016634_Glyma0    K H E - - - - - - - - - - - - - - - - - - - E G E D E S G - - T S S S Y L S L S -
 
0