fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G05790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041952 not found in 292aa AT5G05790.1 1st_1st 0.459649122 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G05790.1     METLHPLLSHVPTSDHRFVVQEMMCL-QSSSWTKEENKKFERALAVYADDTPDRWFKVAA
pt041952_POPTR_ METLYSSWS----------MSNPICVAQTTEWTKEENKMFERALAIFDEHEPDRWLKVAA
                ****:.  *          :.: :*: *::.******* ******:: :. ****:****

AT5G05790.1     MIPGKTISDVMRQYSKLEEDLFDIEAGLVPIPGYRSVTPCGF-DQVVSPRDFDAYRKLPN
pt041952_POPTR_ MIPGKTVNDVIKQYKKLEEDVCDIEAGRVPVPGYLSSS---FTSELVDNSTFDAYRKRPL
                ******:.**::**.*****: ***** **:*** * :   * .::*.   ****** * 

AT5G05790.1     GARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYYQ
pt041952_POPTR_ NIKSADQQRKKGVPWTEEEHRRFLMGLLKHGKGDWRNISRNFVGSKTPTQVASHAQKYFI
                . :. **:*:**************:****:****************************: 

AT5G05790.1     R-QLSGAKDKRRPSIHDITTVNLLNANLSRPSS-------DHGCLVSKQAEP----KLGF
pt041952_POPTR_ RQQLSGVKDKRRPSIHDITTLNL--AGSTSPSDGDKASSLDQSDVLLPQQKPAGMQKL-L
                * ****.*************:**  *. : **.       *:. ::  * :*    ** :

AT5G05790.1     TDRDNAEEG-VMFLGQNLSSVFSS--YDPA---IKFSGANVYG---EGGYCISQDLETRK
pt041952_POPTR_ IDWDESKDGSVMTFGSTHGDLFESSPYEISSNGLTFQGQNLYAGARHGARIKPRNLVFQL
                 * *::::* ** :*.. ..:*.*  *: :   :.*.* *:*.   .*.   .::*  : 

AT5G05790.1     --------
pt041952_POPTR_ SPPRFQIH
BoxShade v3.31 C (beta, 970507) Output
AT5G05790.1     M E T L H P L L S H V P T S D H R F V V Q E M M C L - Q S S S W T K E E N K K F E R A L A V Y A D D T P D R W F K V A A
pt041952_POPTR_    M E T L Y S S W S - - - - - - - - - - M S N P I C V A Q T T E W T K E E N K M F E R A L A I F D E H E P D R W L K V A A
 
AT5G05790.1     M I P G K T I S D V M R Q Y S K L E E D L F D I E A G L V P I P G Y R S V T P C G F - D Q V V S P R D F D A Y R K L P N
pt041952_POPTR_    M I P G K T V N D V I K Q Y K K L E E D V C D I E A G R V P V P G Y L S S S - - - F T S E L V D N S T F D A Y R K R P L
 
AT5G05790.1     G A R G F D Q D R R K G V P W T E E E H R R F L L G L L K Y G K G D W R N I S R N F V G S K T P T Q V A S H A Q K Y Y Q
pt041952_POPTR_    N I K S A D Q Q R K K G V P W T E E E H R R F L M G L L K H G K G D W R N I S R N F V G S K T P T Q V A S H A Q K Y F I
 
AT5G05790.1     R - Q L S G A K D K R R P S I H D I T T V N L L N A N L S R P S S - - - - - - - D H G C L V S K Q A E P - - - - K L G F
pt041952_POPTR_    R Q Q L S G V K D K R R P S I H D I T T L N L - - A G S T S P S D G D K A S S L D Q S D V L L P Q Q K P A G M Q K L - L
 
AT5G05790.1     T D R D N A E E G - V M F L G Q N L S S V F S S - - Y D P A - - - I K F S G A N V Y G - - - E G G Y C I S Q D L E T R K
pt041952_POPTR_    I D W D E S K D G S V M T F G S T H G D L F E S S P Y E I S S N G L T F Q G Q N L Y A G A R H G A R I K P R N L V F Q L
 
AT5G05790.1     - - - - - - - -
pt041952_POPTR_    S P P R F Q I H
 
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