fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G05790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm039130 not found in 306aa AT2G38090.1 1st_not 0.449122807 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G05790.1     --METLHPLLSHVPTSDHRFVVQEMMCLQSSSWTKEENKKFERALAVYADDTPDRWFKVA
gm039130_Glyma1 MELETIYP-PCFMPNSN--WFVQES---HSTEWTREDNKKFESALAIYDNDTPDRWFKVA
                  :**::*  ..:*.*:  :.***    :*:.**:*:***** ***:* :**********

AT5G05790.1     AMIPGKTISDVMRQYSKLEEDLFDIEAGLVPIPGYRSVTPCGFD-QVVSPRDFDAYRKLP
gm039130_Glyma1 AMIPGKTVFDVIKQYRELEEDVSEIEAGRVPIPGYLASS---FTFELVDNHNYDGCRRRL
                *******: **::** :****: :**** ****** : :   *  ::*. :::*. *:  

AT5G05790.1     NGARGFDQDRRKGVPWTEEEHRRFLLGLLKYGKGDWRNISRNFVGSKTPTQVASHAQKYY
gm039130_Glyma1 APVRGSDQERKKGVPWTEDEHRRFLMGLLKYGKGDWRNISRNFVVTKTPTQVASHAQKYY
                  .** **:*:*******:******:****************** :**************

AT5G05790.1     QRQ-LSGAKDKRRPSIHDITTVNLLNANLS---RPS--SDHGCLVSKQ-----AEPKLGF
gm039130_Glyma1 IRQKVSGGKDKRRPSIHDITTVNLTETSASDKNKPQLFNASPVLAPQQKLNSISKVQLGW
                 ** :**.**************** ::. *   :*.  .    *..:*     :: :**:

AT5G05790.1     TDRDNAEEGVMFLGQNLSSVFSSYDP-----AIKFSGANVYGEG-----------GYCIS
gm039130_Glyma1 TSSHYNDGSFMVFNPNSDALFVSSSPDVTSMALKMQGQDLYDCALHEAYAKVKVPGFSMA
                *. .  : ..*.:. * .::* * .*     *:*:.* ::*. .           *:.::

AT5G05790.1     -QDLETRK-------
gm039130_Glyma1 PRDFNNEAVFGIHAL
                 :*::..
BoxShade v3.31 C (beta, 970507) Output
AT5G05790.1     - - M E T L H P L L S H V P T S D H R F V V Q E M M C L Q S S S W T K E E N K K F E R A L A V Y A D D T P D R W F K V A
gm039130_Glyma1    M E L E T I Y P - P C F M P N S N - - W F V Q E S - - - H S T E W T R E D N K K F E S A L A I Y D N D T P D R W F K V A
 
AT5G05790.1     A M I P G K T I S D V M R Q Y S K L E E D L F D I E A G L V P I P G Y R S V T P C G F D - Q V V S P R D F D A Y R K L P
gm039130_Glyma1    A M I P G K T V F D V I K Q Y R E L E E D V S E I E A G R V P I P G Y L A S S - - - F T F E L V D N H N Y D G C R R R L
 
AT5G05790.1     N G A R G F D Q D R R K G V P W T E E E H R R F L L G L L K Y G K G D W R N I S R N F V G S K T P T Q V A S H A Q K Y Y
gm039130_Glyma1    A P V R G S D Q E R K K G V P W T E D E H R R F L M G L L K Y G K G D W R N I S R N F V V T K T P T Q V A S H A Q K Y Y
 
AT5G05790.1     Q R Q - L S G A K D K R R P S I H D I T T V N L L N A N L S - - - R P S - - S D H G C L V S K Q - - - - - A E P K L G F
gm039130_Glyma1    I R Q K V S G G K D K R R P S I H D I T T V N L T E T S A S D K N K P Q L F N A S P V L A P Q Q K L N S I S K V Q L G W
 
AT5G05790.1     T D R D N A E E G V M F L G Q N L S S V F S S Y D P - - - - - A I K F S G A N V Y G E G - - - - - - - - - - - G Y C I S
gm039130_Glyma1    T S S H Y N D G S F M V F N P N S D A L F V S S S P D V T S M A L K M Q G Q D L Y D C A L H E A Y A K V K V P G F S M A
 
AT5G05790.1     - Q D L E T R K - - - - - - -
gm039130_Glyma1    P R D F N N E A V F G I H A L
 
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