fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06250.1 SSRTVRLFGVNLECQ at 214/267 in AT5G06250.1
SSRTVRLFGVNLECQ at 229/282 in AT5G06250.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp021776 SMAGSCLNLDLQHSPL in 625/951 AT1G13260.1 1st_not 0.420289855 II
TSSGTRLFGVDLERA in 691/951
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06250.1     --------------------------------MSVNHYST--------------------
pp021776_Pp1s13 MCLNAKDEKAVGMWSKPASRSSSEPHHGPDVTLRLNNFDTLVASSSDSDVSSFKIVECPS
                                                : :*::.*                    

AT5G06250.1     ---------------------------------------------------------DH-
pp021776_Pp1s13 QGREEASTSVVIRETNPASPIPKFYTIEEKTAMLGVAEAAAANTLQVHGIPRFQRHIDHD
                                                                         ** 

AT5G06250.1     ------------------------------------------------------------
pp021776_Pp1s13 RSRLHDSSMLRTSGKDSENCFRADAEEHRAYVASNLESFGERSHPLDLLGSRLEAEFSRG
                                                                            

AT5G06250.1     ------------------------------------------------------------
pp021776_Pp1s13 ANLKQWPLGSRNVGQRCGSGELERTQSGPSAFLGSGSLDTEQRGSLERTHSGPSFSGSGD
                                                                            

AT5G06250.1     --------------------------------------HHTLLW----------------
pp021776_Pp1s13 SEYGDDRGREQSNSKLPSSQFRGVVPQSNGRWGAQIYEKHQRIWLGTFNTEEEAARAYDT
                                                      :*  :*                

AT5G06250.1     ------------------------------QQQQ-----HRHT-----------------
pp021776_Pp1s13 AAIKFRGRDAMTNFRPVTDSEYESEFLRSFSKEQIVEMLRRHTYDEELDQCKKVFNMDAA
                                              .::*     :***                 

AT5G06250.1     ------------------------------------TDTSETTTTATWLHDDLKES----
pp021776_Pp1s13 ANPVSARRRVLEMCRSSNPGTRLSVGSFSLLQNTFSADTSTTLAPPNLPRDEPRESSPTR
                                                    :*** * :...  :*: :**    

AT5G06250.1     --LFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESG
pp021776_Pp1s13 EHLFDKAVTPSDVGKLNRLVIPKQHAERCFPL----------DLSANSPGQTLSFEDVSG
                  **:*::*******************: ***          * *:.. *  ***** **

AT5G06250.1     KSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRR---G
pp021776_Pp1s13 KHWRFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGR--NHELYIDFRRKQITA
                * *************************:*:**.**:* *:* *  .:.*:*.:**:   .

AT5G06250.1     QGSSSS-----------------------------------------VAATNSAVNTSSM
pp021776_Pp1s13 GGTSTSDRSSFRSAWSGPCNNAYAPSNGPVSPLNSRMWQPFSFSVPHVTVTSSGIQPSSM
                 *:*:*                                         *:.*.*.::.***

AT5G06250.1     GALSYHQI-----------------------------------------HAT--------
pp021776_Pp1s13 YGSIYNQMMQSARGTSAASGDLGSVQDSAIPSMAGSCLNLDLQHSPLKCHAATEDFILHI
                 .  *:*:                                         **:        

AT5G06250.1     ------------------RAAVATAAETHSTPSSSVVGSSRTVRLFGVNLE------CQM
pp021776_Pp1s13 DRPLRQSADMDGGSNIHDRSLVASSSST-SSQSEEAPSTSSGTRLFGVDLERAAPLACKV
                                  *: **:::.* *: *... .:*  .*****:**      *::

AT5G06250.1     D-----------------------------------------------------------
pp021776_Pp1s13 SPLQSIPSFTSSALQSKLSEGHESSQGNLKTIHDGGNIPPSASLSALTSGEFLSFRLGNA
                .                                                           

AT5G06250.1     ---------------EN-------------------------------DGDD--------
pp021776_Pp1s13 FKSLQCKHPVEQSSPENGGAPVRLSLQASTSSSSGHRGSSPLKSTAMTEGEDPKARSSTE
                               **                               :*:*        

AT5G06250.1     SVAVA----TTVESP-----------------------DGYYG---------------QN
pp021776_Pp1s13 SVASALDSNSSRSSPMLLEKRKRENSNRDYMQGCSDQADGAANVPLTLAHSEFRSSLEQA
                *** *    :: .**                       **  .               * 

AT5G06250.1     MYYYYSHPHNM--------------VILTLL-----------------------------
pp021776_Pp1s13 RHAWHKHEDDASAEVQTSVKRHCSPIQASLLRQGSGTTEQSDFLPKPDLVQEKQKPQYDS
                 : ::.* .:               :  :**                             

AT5G06250.1     ----
pp021776_Pp1s13 SNLR
BoxShade v3.31 C (beta, 970507) Output
AT5G06250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S V N H Y S T - - - - - - - - - - - - - - - - - - - -
pp021776_Pp1s13    M C L N A K D E K A V G M W S K P A S R S S S E P H H G P D V T L R L N N F D T L V A S S S D S D V S S F K I V E C P S
 
AT5G06250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D H -
pp021776_Pp1s13    Q G R E E A S T S V V I R E T N P A S P I P K F Y T I E E K T A M L G V A E A A A A N T L Q V H G I P R F Q R H I D H D
 
AT5G06250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp021776_Pp1s13    R S R L H D S S M L R T S G K D S E N C F R A D A E E H R A Y V A S N L E S F G E R S H P L D L L G S R L E A E F S R G
 
AT5G06250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp021776_Pp1s13    A N L K Q W P L G S R N V G Q R C G S G E L E R T Q S G P S A F L G S G S L D T E Q R G S L E R T H S G P S F S G S G D
 
AT5G06250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H H T L L W - - - - - - - - - - - - - - - -
pp021776_Pp1s13    S E Y G D D R G R E Q S N S K L P S S Q F R G V V P Q S N G R W G A Q I Y E K H Q R I W L G T F N T E E E A A R A Y D T
 
AT5G06250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Q Q Q Q - - - - - H R H T - - - - - - - - - - - - - - - - -
pp021776_Pp1s13    A A I K F R G R D A M T N F R P V T D S E Y E S E F L R S F S K E Q I V E M L R R H T Y D E E L D Q C K K V F N M D A A
 
AT5G06250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T D T S E T T T T A T W L H D D L K E S - - - -
pp021776_Pp1s13    A N P V S A R R R V L E M C R S S N P G T R L S V G S F S L L Q N T F S A D T S T T L A P P N L P R D E P R E S S P T R
 
AT5G06250.1     - - L F E K S L T P S D V G K L N R L V I P K Q H A E K Y F P L N A V L V S S A A A D T S S S E K G M L L S F E D E S G
pp021776_Pp1s13    E H L F D K A V T P S D V G K L N R L V I P K Q H A E R C F P L - - - - - - - - - - D L S A N S P G Q T L S F E D V S G
 
AT5G06250.1     K S W R F R Y S Y W N S S Q S Y V L T K G W S R F V K D K Q L D P G D V V F F Q R H R S D S R R L F I G W R R R - - - G
pp021776_Pp1s13    K H W R F R Y S Y W N S S Q S Y V L T K G W S R F V K E K K L D A G D I V S F E R G R - - N H E L Y I D F R R K Q I T A
 
AT5G06250.1     Q G S S S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V A A T N S A V N T S S M
pp021776_Pp1s13    G G T S T S D R S S F R S A W S G P C N N A Y A P S N G P V S P L N S R M W Q P F S F S V P H V T V T S S G I Q P S S M
 
AT5G06250.1     G A L S Y H Q I - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H A T - - - - - - - -
pp021776_Pp1s13    Y G S I Y N Q M M Q S A R G T S A A S G D L G S V Q D S A I P S M A G S C L N L D L Q H S P L K C H A A T E D F I L H I
 
AT5G06250.1     - - - - - - - - - - - - - - - - - - R A A V A T A A E T H S T P S S S V V G S S R T V R L F G V N L E - - - - - - C Q M
pp021776_Pp1s13    D R P L R Q S A D M D G G S N I H D R S L V A S S S S T - S S Q S E E A P S T S S G T R L F G V D L E R A A P L A C K V
 
AT5G06250.1     D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp021776_Pp1s13    S P L Q S I P S F T S S A L Q S K L S E G H E S S Q G N L K T I H D G G N I P P S A S L S A L T S G E F L S F R L G N A
 
AT5G06250.1     - - - - - - - - - - - - - - - E N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D G D D - - - - - - - -
pp021776_Pp1s13    F K S L Q C K H P V E Q S S P E N G G A P V R L S L Q A S T S S S S G H R G S S P L K S T A M T E G E D P K A R S S T E
 
AT5G06250.1     S V A V A - - - - T T V E S P - - - - - - - - - - - - - - - - - - - - - - - D G Y Y G - - - - - - - - - - - - - - - Q N
pp021776_Pp1s13    S V A S A L D S N S S R S S P M L L E K R K R E N S N R D Y M Q G C S D Q A D G A A N V P L T L A H S E F R S S L E Q A
 
AT5G06250.1     M Y Y Y Y S H P H N M - - - - - - - - - - - - - - V I L T L L - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp021776_Pp1s13    R H A W H K H E D D A S A E V Q T S V K R H C S P I Q A S L L R Q G S G T T E Q S D F L P K P D L V Q E K Q K P Q Y D S
 
AT5G06250.1     - - - -
pp021776_Pp1s13    S N L R
 
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