fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06250.1 SSRTVRLFGVNLECQ at 214/267 in AT5G06250.1
SSRTVRLFGVNLECQ at 229/282 in AT5G06250.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007927 NSKRLRLFGVNLECQ in 298/353 AT2G36080.1 1st_not 0.489855072 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06250.1     MSVNHYSTDHHHTLLWQQQQHRHTTDTSETTTTA----------------------TWLH
pt007927_POPTR_ MSINHFSTDLQETLSWWAQQHQQQQPIMEPNPNASSSTPNEPPNISNPNSSWPPHHSWLN
                **:**:*** :.** *  ***::     *....*                      :**:

AT5G06250.1     --------------------------DDL----------------------KESLFEKSL
pt007927_POPTR_ PYNTAQQPSSMFLPQNPTLNFNLNEEDDEDQDHEQQQQDETQQEQEVLVLDKEPMFEKPL
                                          **                       **.:***.*

AT5G06250.1     TPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSWRFRYS
pt007927_POPTR_ TPSDVGKLNRLVIPKQHAEKYFPLSG----------DSVDKGLLLSFEDESGRYWKFRYS
                ************************..          .* :**:*********: *:****

AT5G06250.1     YWNSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIGWRRRGQ-GSSSSVAAT
pt007927_POPTR_ YWNSSQSYVLTKGWSRYVKEKQLDAGDVVLFERHRTDGDRLFIGWRRRGESGSNSGVMVQ
                ****************:**:****.****:*:***:*. **********: **.*.* . 

AT5G06250.1     NSAVNTSSMGA-----------LSYHQIHATRAAVATAAETHSTP-----------SSSV
pt007927_POPTR_ GSGGGVWSRGILYPSSSSGPHHLSSSNIQHDLGANVTAANVPYQPYCLHAGSIAQNQTTP
                .*. .. * *            **  :*:   .* .***:.   *           .:: 

AT5G06250.1     VGSSRTVRLFGVNLECQMDENDGDDSVAVATTVESPDG-----YYGQNMYYYYSHPHNMV
pt007927_POPTR_ LGNSKRLRLFGVNLECQLDGS--EPSTPDGSSVSSLQGPGHPQFYSQSSYSSNSTHGQMV
                :*.*: :**********:* .  : *.. .::*.* :*     :*.*. *   *   :**

AT5G06250.1     I-LTLL
pt007927_POPTR_ SHMTL-
                  :**
BoxShade v3.31 C (beta, 970507) Output
AT5G06250.1     M S V N H Y S T D H H H T L L W Q Q Q Q H R H T T D T S E T T T T A - - - - - - - - - - - - - - - - - - - - - - T W L H
pt007927_POPTR_    M S I N H F S T D L Q E T L S W W A Q Q H Q Q Q Q P I M E P N P N A S S S T P N E P P N I S N P N S S W P P H H S W L N
 
AT5G06250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - D D L - - - - - - - - - - - - - - - - - - - - - - K E S L F E K S L
pt007927_POPTR_    P Y N T A Q Q P S S M F L P Q N P T L N F N L N E E D D E D Q D H E Q Q Q Q D E T Q Q E Q E V L V L D K E P M F E K P L
 
AT5G06250.1     T P S D V G K L N R L V I P K Q H A E K Y F P L N A V L V S S A A A D T S S S E K G M L L S F E D E S G K S W R F R Y S
pt007927_POPTR_    T P S D V G K L N R L V I P K Q H A E K Y F P L S G - - - - - - - - - - D S V D K G L L L S F E D E S G R Y W K F R Y S
 
AT5G06250.1     Y W N S S Q S Y V L T K G W S R F V K D K Q L D P G D V V F F Q R H R S D S R R L F I G W R R R G Q - G S S S S V A A T
pt007927_POPTR_    Y W N S S Q S Y V L T K G W S R Y V K E K Q L D A G D V V L F E R H R T D G D R L F I G W R R R G E S G S N S G V M V Q
 
AT5G06250.1     N S A V N T S S M G A - - - - - - - - - - - L S Y H Q I H A T R A A V A T A A E T H S T P - - - - - - - - - - - S S S V
pt007927_POPTR_    G S G G G V W S R G I L Y P S S S S G P H H L S S S N I Q H D L G A N V T A A N V P Y Q P Y C L H A G S I A Q N Q T T P
 
AT5G06250.1     V G S S R T V R L F G V N L E C Q M D E N D G D D S V A V A T T V E S P D G - - - - - Y Y G Q N M Y Y Y Y S H P H N M V
pt007927_POPTR_    L G N S K R L R L F G V N L E C Q L D G S - - E P S T P D G S S V S S L Q G P G H P Q F Y S Q S S Y S S N S T H G Q M V
 
AT5G06250.1     I - L T L L
pt007927_POPTR_    S H M T L -
 
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