fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06250.1 SSRTVRLFGVNLECQ at 214/267 in AT5G06250.1
SSRTVRLFGVNLECQ at 229/282 in AT5G06250.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028463 SSRQLRLFGVNLDCG in 273/322 AT2G36080.1 1st_not 0.457971014 II
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06250.1     --------MSVNHYSTDHHHTLLWQQQQHRHTTDTSETTTTATWLHDDLKESLFEKSLTP
Sb028463_Sorbi1 LFLSSSRRMAMNHLSQEHPQAWPWGVAMY----------TNLHYQHHYEKEHLFEKPLTP
                        *::** * :* ::  *    :          *.  : *.  ** ****.***

AT5G06250.1     SDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDESGKSWRFRYSYW
Sb028463_Sorbi1 SDVGKLNRLVIPKQHAERYFPLSG----------DSGEKGLILSFEDEAGKPWRFRYSYW
                *****************:****..          .*.***::******:**.********

AT5G06250.1     NSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRS--DSRRLFIGWRRRGQGSSSSVAA--
Sb028463_Sorbi1 TSSQSYVLTKGWSRYVKEKQLDAGDVVHFERMRSFGMGDRLFISYRRHGE--SATVAAAP
                .*************:**:****.****.*:* **   . ****.:**:*:  *::***  

AT5G06250.1     --------------------------------TNSAVNTSSMGALSY-HQIHATRAAVAT
Sb028463_Sorbi1 PPPPPPPAVRVVAPAQSTGGGEQQPWSPMCYSTSGSYPTSPANSHAYRHSVDHDHSNMQH
                                                *..:  **. .: :* *.:.  :: :  

AT5G06250.1     AAETHS-----TPSSSVVGSSRTVRLFGVNLEC----QMDENDGDDSVAVATTVESPDGY
Sb028463_Sorbi1 AGESQSDRDNRSCSAASAPSSRQLRLFGVNLDCGPGPELEP-------------ETPTAM
                *.*::*     : *:: . *** :*******:*    :::              *:* . 

AT5G06250.1     YGQNMYYYYSHPHNMVILTLL----------
Sb028463_Sorbi1 YG----YMHQSPYTSNNWSALKIHQNLTHHI
                **    * :. *:.    : *
BoxShade v3.31 C (beta, 970507) Output
AT5G06250.1     - - - - - - - - M S V N H Y S T D H H H T L L W Q Q Q Q H R H T T D T S E T T T T A T W L H D D L K E S L F E K S L T P
Sb028463_Sorbi1    L F L S S S R R M A M N H L S Q E H P Q A W P W G V A M Y - - - - - - - - - - T N L H Y Q H H Y E K E H L F E K P L T P
 
AT5G06250.1     S D V G K L N R L V I P K Q H A E K Y F P L N A V L V S S A A A D T S S S E K G M L L S F E D E S G K S W R F R Y S Y W
Sb028463_Sorbi1    S D V G K L N R L V I P K Q H A E R Y F P L S G - - - - - - - - - - D S G E K G L I L S F E D E A G K P W R F R Y S Y W
 
AT5G06250.1     N S S Q S Y V L T K G W S R F V K D K Q L D P G D V V F F Q R H R S - - D S R R L F I G W R R R G Q G S S S S V A A - -
Sb028463_Sorbi1    T S S Q S Y V L T K G W S R Y V K E K Q L D A G D V V H F E R M R S F G M G D R L F I S Y R R H G E - - S A T V A A A P
 
AT5G06250.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - T N S A V N T S S M G A L S Y - H Q I H A T R A A V A T
Sb028463_Sorbi1    P P P P P P P A V R V V A P A Q S T G G G E Q Q P W S P M C Y S T S G S Y P T S P A N S H A Y R H S V D H D H S N M Q H
 
AT5G06250.1     A A E T H S - - - - - T P S S S V V G S S R T V R L F G V N L E C - - - - Q M D E N D G D D S V A V A T T V E S P D G Y
Sb028463_Sorbi1    A G E S Q S D R D N R S C S A A S A P S S R Q L R L F G V N L D C G P G P E L E P - - - - - - - - - - - - - E T P T A M
 
AT5G06250.1     Y G Q N M Y Y Y Y S H P H N M V I L T L L - - - - - - - - - -
Sb028463_Sorbi1    Y G - - - - Y M H Q S P Y T S N N W S A L K I H Q N L T H H I
 
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