fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp000816 not found in 335aa AT1G01350.1 1st_not 0.548961424 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06420.1     MEPFVVKENIVASASSPMKKRRIDHTESADGSAINASNSSSIGGNDTVMNMAEFGNDNSN
pp000816_Pp1s11 ME-------------AP--------------SEAGAAAAPAAGA----------------
                **             :*              *  .*: :.: *.                

AT5G06420.1     NQESQQVCTFFKKPTKSKNIRKR-TIDADEEDGDSKSE---SSILQNLKKVAKPD-SNLY
pp000816_Pp1s11 ---------FFKKKIQNKNIRKRPTID----DGDEEEENAGSAV--NKGKIAKKGVGRLE
                         ****  :.****** ***    ***.:.*   *::  *  *:** . ..* 

AT5G06420.1     FSSGPSTRTS-----------GAPERPVFHYDSSKEIQVQNDSGATATLETETDFNQDAR
pp000816_Pp1s11 FNSGAPVGTSKVQNSEESDKAGEVERATFVYESTRQVQTQDDSRATAVSEIETEFDRDNR
                *.**... **           *  **..* *:*::::*.*:** ***. * **:*::* *

AT5G06420.1     AIRERVLKKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRA
pp000816_Pp1s11 AIRERVLKQASEALKSG--EPSNSKVYKGIHGYTDHKAGFRQEHTISREKAGGAHGPLRA
                ********:*..***..  :.*:.*:***************:*:*** *****:******

AT5G06420.1     SAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKPGWQIEKEWEEAEKVRKR
pp000816_Pp1s11 SAHIRMTVRFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYKSGWQMEREWDQEEKLRKQ
                *****::.**************************:*******.***:*:**:: **:**:

AT5G06420.1     NKAMGVEDDDD-EADKDSDEDENALPFACFICREPFLDPVVTKCKHYFCEHCALKHHTKN
pp000816_Pp1s11 RLARGEADTEEGEGAGDDSDDEDALPFACFICREPFTDPVVTTCKHYFCEHCALKHHSRN
                . * *  * :: *.  *..:**:************* *****.**************::*

AT5G06420.1     KKCFVCNQPTMGIFNAAHEIKKRMAEERSKAEQGL
pp000816_Pp1s11 KLCYVCNKPTNGVFNTAHEIVRKQKEAKQAAEGGD
                * *:***:** *:**:**** ::  * :. ** *
BoxShade v3.31 C (beta, 970507) Output
AT5G06420.1     M E P F V V K E N I V A S A S S P M K K R R I D H T E S A D G S A I N A S N S S S I G G N D T V M N M A E F G N D N S N
pp000816_Pp1s11    M E - - - - - - - - - - - - - A P - - - - - - - - - - - - - - S E A G A A A A P A A G A - - - - - - - - - - - - - - - -
 
AT5G06420.1     N Q E S Q Q V C T F F K K P T K S K N I R K R - T I D A D E E D G D S K S E - - - S S I L Q N L K K V A K P D - S N L Y
pp000816_Pp1s11    - - - - - - - - - F F K K K I Q N K N I R K R P T I D - - - - D G D E E E E N A G S A V - - N K G K I A K K G V G R L E
 
AT5G06420.1     F S S G P S T R T S - - - - - - - - - - - G A P E R P V F H Y D S S K E I Q V Q N D S G A T A T L E T E T D F N Q D A R
pp000816_Pp1s11    F N S G A P V G T S K V Q N S E E S D K A G E V E R A T F V Y E S T R Q V Q T Q D D S R A T A V S E I E T E F D R D N R
 
AT5G06420.1     A I R E R V L K K A D H A L K G N K K K A S D E K L Y K G I H G Y T D H K A G F R R E Q T I S S E K A G G S H G P L R A
pp000816_Pp1s11    A I R E R V L K Q A S E A L K S G - - E P S N S K V Y K G I H G Y T D H K A G F R Q E H T I S R E K A G G A H G P L R A
 
AT5G06420.1     S A H I R V S A R F D Y Q P D I C K D Y K E T G Y C G Y G D S C K F L H D R G D Y K P G W Q I E K E W E E A E K V R K R
pp000816_Pp1s11    S A H I R M T V R F D Y Q P D I C K D Y K E T G Y C G Y G D S C K F M H D R G D Y K S G W Q M E R E W D Q E E K L R K Q
 
AT5G06420.1     N K A M G V E D D D D - E A D K D S D E D E N A L P F A C F I C R E P F L D P V V T K C K H Y F C E H C A L K H H T K N
pp000816_Pp1s11    R L A R G E A D T E E G E G A G D D S D D E D A L P F A C F I C R E P F T D P V V T T C K H Y F C E H C A L K H H S R N
 
AT5G06420.1     K K C F V C N Q P T M G I F N A A H E I K K R M A E E R S K A E Q G L
pp000816_Pp1s11    K L C Y V C N K P T N G V F N T A H E I V R K Q K E A K Q A A E G G D
 
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