fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06420.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb027071 not found in 377aa AT1G01350.1 1st_not 0.537091988 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06420.1     ---MEPFVVKENIVAS--ASSPMKKRRIDHTES------------------ADGSA-INA
Sb027071_Sorbi1 ALLLLLLLVLCHLLADLLCSVEDAQRRFEADEALLVLRVMLQSAMFTKVVLAFGDHWINE
                   :  ::*  :::*.  .*    :**::  *:                  * *.  ** 

AT5G06420.1     SNSSSIGGNDTVMNMAEFGNDNSNNQESQQ-------VCTFFKKPTKSKN----------
Sb027071_Sorbi1 WLSANVAG------------------KGQRLLIILVLICCLIITPIPTTHGNAPLAGLLG
                  *:.:.*                  :.*:       :* :: .*  :.:          

AT5G06420.1     -----------------------IRKRTIDADEEDGDSKSESSILQNLKKVAKP--DSNL
Sb027071_Sorbi1 LLMFPLELPPGLVIPTVVHELAGIAVATI---------PRLLVVLADVGLVVEPLGDANV
                                       *   **              :* ::  *.:*  *:*:

AT5G06420.1     YFSSGPSTRTSGAPER-PVFHYDSSKEIQVQND------------SGATATLETETD---
Sb027071_Sorbi1 RGRPERAVRTAGLLARHRVLPPEPSLVVRVAVDPLVHLPGGGGGGTGGGILLEELLGLLE
                   .  :.**:*   *  *:  :.*  ::*  *            :*.   **   .   

AT5G06420.1     -FNQDARAIRERVLKKADH----ALKGNKKKA----SDEKLYKGIHGYTDHKAGFRREQT
Sb027071_Sorbi1 LFLADGAGVAVELRLRLEHGGCAAVRGLDRPGRLVLEPPRLGGGVGGGENELASGRGRRP
                 *  *. .:  .:  : :*    *::* .: .    .  :*  *: *  :. *. * .:.

AT5G06420.1     ISSEKAGGSHGPLRASAHIRVSARFDYQPDICKDYKETGYCGYGDSCKFLHDRGDYKP--
Sb027071_Sorbi1 LLG--ARGREGAAAAAVVVVIRSR---------------------------GRGGALPHV
                : .  * * .*.  *:. : : :*                           .**.  *  

AT5G06420.1     -GWQIEKEWEEAEKVRKRNKAMGVEDDDDEADKDSDEDENALPFACFICREPFLDPVVTK
Sb027071_Sorbi1 LGW---------------------------------------------------------
                 **                                                         

AT5G06420.1     CKHYFCEHCALKHHTKNKKCFVCNQPTMGIFNAAHEIKKRMAEERSKAEQGL
Sb027071_Sorbi1 ----------FPHETAHRR-----RSTAG---------PRLAAAAAAVGH--
                          : *.* :::     :.* *          *:*   : . :
BoxShade v3.31 C (beta, 970507) Output
AT5G06420.1     - - - M E P F V V K E N I V A S - - A S S P M K K R R I D H T E S - - - - - - - - - - - - - - - - - - A D G S A - I N A
Sb027071_Sorbi1    A L L L L L L L V L C H L L A D L L C S V E D A Q R R F E A D E A L L V L R V M L Q S A M F T K V V L A F G D H W I N E
 
AT5G06420.1     S N S S S I G G N D T V M N M A E F G N D N S N N Q E S Q Q - - - - - - - V C T F F K K P T K S K N - - - - - - - - - -
Sb027071_Sorbi1    W L S A N V A G - - - - - - - - - - - - - - - - - - K G Q R L L I I L V L I C C L I I T P I P T T H G N A P L A G L L G
 
AT5G06420.1     - - - - - - - - - - - - - - - - - - - - - - - I R K R T I D A D E E D G D S K S E S S I L Q N L K K V A K P - - D S N L
Sb027071_Sorbi1    L L M F P L E L P P G L V I P T V V H E L A G I A V A T I - - - - - - - - - P R L L V V L A D V G L V V E P L G D A N V
 
AT5G06420.1     Y F S S G P S T R T S G A P E R - P V F H Y D S S K E I Q V Q N D - - - - - - - - - - - - S G A T A T L E T E T D - - -
Sb027071_Sorbi1    R G R P E R A V R T A G L L A R H R V L P P E P S L V V R V A V D P L V H L P G G G G G G T G G G I L L E E L L G L L E
 
AT5G06420.1     - F N Q D A R A I R E R V L K K A D H - - - - A L K G N K K K A - - - - S D E K L Y K G I H G Y T D H K A G F R R E Q T
Sb027071_Sorbi1    L F L A D G A G V A V E L R L R L E H G G C A A V R G L D R P G R L V L E P P R L G G G V G G G E N E L A S G R G R R P
 
AT5G06420.1     I S S E K A G G S H G P L R A S A H I R V S A R F D Y Q P D I C K D Y K E T G Y C G Y G D S C K F L H D R G D Y K P - -
Sb027071_Sorbi1    L L G - - A R G R E G A A A A A V V V V I R S R - - - - - - - - - - - - - - - - - - - - - - - - - - - G R G G A L P H V
 
AT5G06420.1     - G W Q I E K E W E E A E K V R K R N K A M G V E D D D D E A D K D S D E D E N A L P F A C F I C R E P F L D P V V T K
Sb027071_Sorbi1    L G W - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G06420.1     C K H Y F C E H C A L K H H T K N K K C F V C N Q P T M G I F N A A H E I K K R M A E E R S K A E Q G L
Sb027071_Sorbi1    - - - - - - - - - - F P H E T A H R R - - - - - R S T A G - - - - - - - - - P R L A A A A A A V G H - -
 
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