fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06710.1 MELALSLGDNTK at 1/336 in AT5G06710.1
MELALSLGDNTK at 1/237 in AT5G06710.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt043918 MELALSLGDTSK in 2/344 AT5G06710.1 1st_1st 0.499133448 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT5G06710.1     MELALSLGDNTKKQFSFMEKNSKINNPSVSSTSTSEKDLGFCMALDVAFGGHRSLSSSSS
pt043918_POPTR_ MELALSLGD-TSKPFKFLDKTPKL----------SSKDLGFCMGLGSGF-----------
                ********* *.* *.*::*..*:          *.*******.*. .*           

AT5G06710.1     PSVEDEKKKPAPRAK--KSDEFRVSSSVDPPLQLQL----------------HFPNWLPE
pt043918_POPTR_ PATTRSQDKLGSHESNYQDDERRVSS--DPPLQLDLLPFSPVPRGHQAPSRIRFP-WLTD
                *:.  .:.* ..: .  :.** ****  ******:*                :** **.:

AT5G06710.1     N------SKGRQGGRMPLGAATVVEEEEEEEEAVPSMSVSPPDSVTSSFQLDFGIKSYGY
pt043918_POPTR_ NLVSEPGSTEAPGRRFDVNRLSMDDADE-------GAAISSPNSAASSFQMDFGIRS---
                *      *.   * *: :.  :: : :*       . ::*.*:*.:****:****:*   

AT5G06710.1     ERRSNKRDIDD-EVERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPK
pt043918_POPTR_ -GRDRKRDLDAIDAERASSRAS---DDDENGLTRKKLRLSKEQSAFLEESFKEHNTLNPK
                  *..***:*  :.**::****   :***** *********:******:*****.*****

AT5G06710.1     QKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKEL
pt043918_POPTR_ QKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQEL
                **:*****************************************:***********::**

AT5G06710.1     RTLKTSTPFYMQLPATTLTMCPSCERVA------------TSAAQPSTSAAHNLCLSTSS
pt043918_POPTR_ RALKTSQPFYMQLPATTLTMCPSCERVATTTTSSSGTTTTTTTTNPSTTTTTSTTSSKPL
                *:**** *********************            *::::***::: .   *.. 

AT5G06710.1     LIPVKPR----------PAKQVS
pt043918_POPTR_ SLPAKPRLFPLSHGQVQPHHAAS
                 :*.***          * : .*
BoxShade v3.31 C (beta, 970507) Output
AT5G06710.1     M E L A L S L G D N T K K Q F S F M E K N S K I N N P S V S S T S T S E K D L G F C M A L D V A F G G H R S L S S S S S
pt043918_POPTR_    M E L A L S L G D - T S K P F K F L D K T P K L - - - - - - - - - - S S K D L G F C M G L G S G F - - - - - - - - - - -
 
AT5G06710.1     P S V E D E K K K P A P R A K - - K S D E F R V S S S V D P P L Q L Q L - - - - - - - - - - - - - - - - H F P N W L P E
pt043918_POPTR_    P A T T R S Q D K L G S H E S N Y Q D D E R R V S S - - D P P L Q L D L L P F S P V P R G H Q A P S R I R F P - W L T D
 
AT5G06710.1     N - - - - - - S K G R Q G G R M P L G A A T V V E E E E E E E E A V P S M S V S P P D S V T S S F Q L D F G I K S Y G Y
pt043918_POPTR_    N L V S E P G S T E A P G R R F D V N R L S M D D A D E - - - - - - - G A A I S S P N S A A S S F Q M D F G I R S - - -
 
AT5G06710.1     E R R S N K R D I D D - E V E R S A S R A S N E D N D D E N G S T R K K L R L S K D Q S A F L E D S F K E H S T L N P K
pt043918_POPTR_    - G R D R K R D L D A I D A E R A S S R A S - - - D D D E N G L T R K K L R L S K E Q S A F L E E S F K E H N T L N P K
 
AT5G06710.1     Q K I A L A K Q L N L R P R Q V E V W F Q N R R A R T K L K Q T E V D C E Y L K R C C E S L T E E N R R L Q K E V K E L
pt043918_POPTR_    Q K L A L A K Q L N L R P R Q V E V W F Q N R R A R T K L K Q T E V D C E Y L K R C C E T L T E E N R R L Q K E L Q E L
 
AT5G06710.1     R T L K T S T P F Y M Q L P A T T L T M C P S C E R V A - - - - - - - - - - - - T S A A Q P S T S A A H N L C L S T S S
pt043918_POPTR_    R A L K T S Q P F Y M Q L P A T T L T M C P S C E R V A T T T T S S S G T T T T T T T T N P S T T T T T S T T S S K P L
 
AT5G06710.1     L I P V K P R - - - - - - - - - - P A K Q V S
pt043918_POPTR_    S L P A K P R L F P L S H G Q V Q P H H A A S
 
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