fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007108 not found in 234aa AT3G12130.1 1st_not 0.606263982 II
Pt029972 not found in 304aa AT5G06770.1 not_1st 0.400447427 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G06770.1     MD----ARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDN
pt029972_POPTR_ MEFGGGHRKRTRNDAAF--NGNGGHKKNRQEMESFSTGIGSKSKPCTKFFSTSGCPFGEG
pt007108_POPTR_ MD----TRKRGRPDFKT--NGFGGFKKSKQEMDPLSTGVGSKLKPCTKFFSTAGCPFGES
                *:     *** * :     *. **.*:.:***:.:***:*** *********:*****:.

AT5G06770.1     CHFLHYVPGGYNAAAQMTNLR--PPVSQVSRN----------------------------
pt029972_POPTR_ CHFLHYVPGGFKAVSQMLNVGGSPALPPASRNQGVPTLSYQDRSSPPSVKSRLCNKYNTV
pt007108_POPTR_ CHFLHHVPGGYNAVTQMMNLG--PTVTPPSRS----------------------------
                *****:****::*.:** *:   *.:.  **.                            

AT5G06770.1     -----------MQGSGGPG------------------GRFSGR----GDPGSGPVSIFG-
pt029972_POPTR_ EGCKFGDKCHFAHGEWELGKASAAPSYEDPRAMGPIPGRMS-RHMEHPHQGHGAAASFGS
pt007108_POPTR_ -----------VPGH--LG------------------GRVE-------QPSPGPATSFGV
                             *    *                  **..       . . *..: ** 

AT5G06770.1     -ASTSKISVDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQIN
pt029972_POPTR_ -SATTKISIDASLAGAIIGKNGVNSKHICRVTGAKLSIRDHEADPKKRSIELEGSFDQIS
pt007108_POPTR_ FATTTRISVNASLAGFIIGKGGVHSIQICHQTGVKLSIKEHETNPNLKNIELEGSFEQIA
                 ::*::**::***** ****.*::* :**: **.****::** :*: : *****:*:** 

AT5G06770.1     VASGMVRELIGRLGSVK-KP------QGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDR
pt029972_POPTR_ QASDMVRQLISNVGQASGPPIKNQAMHSSGG-------SNNFKTKICENFNKGSCTFGDR
pt007108_POPTR_ QASKMVEELV-KVNSAKAAA------KTSGGRGGHANPGSNYKTKLCDNFAKGSCTFGQR
                 ** **.:*: .:....  .      :  **       ..*:***:*:.: **.**:*:*

AT5G06770.1     CHFAHGESELRRSGIA
pt029972_POPTR_ CHFAHGAEELRKSGM-
pt007108_POPTR_ CHFAHGAAELRKTAA-
                ******  ***::.
BoxShade v3.31 C (beta, 970507) Output
AT5G06770.1     M D - - - - A R K R G R P E A A A S H N S N G G F K R S K Q E M E S I S T G L G S K S K P C T K F F S T S G C P F G D N
pt029972_POPTR_    M E F G G G H R K R T R N D A A F - - N G N G G H K K N R Q E M E S F S T G I G S K S K P C T K F F S T S G C P F G E G
pt007108_POPTR_    M D - - - - T R K R G R P D F K T - - N G F G G F K K S K Q E M D P L S T G V G S K L K P C T K F F S T A G C P F G E S
 
AT5G06770.1     C H F L H Y V P G G Y N A A A Q M T N L R - - P P V S Q V S R N - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt029972_POPTR_    C H F L H Y V P G G F K A V S Q M L N V G G S P A L P P A S R N Q G V P T L S Y Q D R S S P P S V K S R L C N K Y N T V
pt007108_POPTR_    C H F L H H V P G G Y N A V T Q M M N L G - - P T V T P P S R S - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT5G06770.1     - - - - - - - - - - - M Q G S G G P G - - - - - - - - - - - - - - - - - - G R F S G R - - - - G D P G S G P V S I F G -
pt029972_POPTR_    E G C K F G D K C H F A H G E W E L G K A S A A P S Y E D P R A M G P I P G R M S - R H M E H P H Q G H G A A A S F G S
pt007108_POPTR_    - - - - - - - - - - - V P G H - - L G - - - - - - - - - - - - - - - - - - G R V E - - - - - - - Q P S P G P A T S F G V
 
AT5G06770.1     - A S T S K I S V D A S L A G A I I G K G G I H S K Q I C R E T G A K L S I K D H E R D P N L K I I E L E G T F E Q I N
pt029972_POPTR_    - S A T T K I S I D A S L A G A I I G K N G V N S K H I C R V T G A K L S I R D H E A D P K K R S I E L E G S F D Q I S
pt007108_POPTR_    F A T T T R I S V N A S L A G F I I G K G G V H S I Q I C H Q T G V K L S I K E H E T N P N L K N I E L E G S F E Q I A
 
AT5G06770.1     V A S G M V R E L I G R L G S V K - K P - - - - - - Q G I G G P E G K P H P G S N Y K T K I C D R Y S K G N C T Y G D R
pt029972_POPTR_    Q A S D M V R Q L I S N V G Q A S G P P I K N Q A M H S S G G - - - - - - - S N N F K T K I C E N F N K G S C T F G D R
pt007108_POPTR_    Q A S K M V E E L V - K V N S A K A A A - - - - - - K T S G G R G G H A N P G S N Y K T K L C D N F A K G S C T F G Q R
 
AT5G06770.1     C H F A H G E S E L R R S G I A
pt029972_POPTR_    C H F A H G A E E L R K S G M -
pt007108_POPTR_    C H F A H G A A E L R K T A A -
 
0