fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT5G06770.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm004340 not found in 295aa AT3G12130.1 1st_not 0.422818791 II
Gm007036 not found in 295aa AT5G06770.1 not_1st 0.411633109 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT5G06770.1     MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL
gm007036_Glyma0 MDIRKRGRHETG--FSLNGGFKRSKQEMESLSTGVGSKSKPCTKFFSTAGCPFGEGCHFL
gm004340_Glyma0 MDVRKRGRPDV----NLNGAVKKTKQELESLSSGVGSKSKPCTKFFSTAGCPFGEGCHFL
                ** ***** :.    . **..*::***:**:*:*:*************:*****:.****

AT5G06770.1     HYVPGGYNAAAQMTNLRPPVSQV-SRNM-------QGSG---------------------
gm007036_Glyma0 HYVPGGYNAVAHMMNLTPAAPPPPSRNVAALPHVPNGSAPSAVKTRICNKFNTAEGCKFG
gm004340_Glyma0 HYVPGGYNVVAHMMNLKPAAPPP--RTVAAPPPIPNGSAPSAVKTRICNKFNTAEGCKFG
                ********..*:* ** *...    *.:       :**.                     

AT5G06770.1     -----------------------------GP--GGRFSGRGDPGSGPVSIFGA-STSKIS
gm007036_Glyma0 DKCHFAHGEWELGKHIAPSFDDHH---AMGPPGAGRLAGRME-PPGPAASFGANSTAKIS
gm004340_Glyma0 DKCHFAHGEWELGKPIAPSIDDHHHHRPLGPPAGGRMAGRIEPPPAMAGSFGAISTAKIS
                                             **  .**::** :  .. .. *** **:***

AT5G06770.1     VDASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVRE
gm007036_Glyma0 VEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGSFEQIKEASNMVKD
gm004340_Glyma0 VEASLAGAIIGKGGVNSKQICRQTGAKLSIREHESDPNLRNIELEGTFEQIKEASNMVKD
                *:************::******:*******::** ****: *****:****: **.**::

AT5G06770.1     LIGRLGSVKKPQGIGGPEGKPHP-GSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSG
gm007036_Glyma0 LLLTLQMSAPPKTTPGVPGAPASHGSNFKTKLCENFAKGSCTFGDRCHFAHGASELRKSG
gm004340_Glyma0 LLLTVSMSAPPKSTPGVPGAPAPPGSNFKTKLCENFAKGSCTFGERCHFAHGAAELRKSG
                *:  :     *:   *  * * . ***:***:*:.::**.**:*:******* :***:**

AT5G06770.1     IA
gm007036_Glyma0 V-
gm004340_Glyma0 V-
                :
BoxShade v3.31 C (beta, 970507) Output
AT5G06770.1     M D A R K R G R P E A A A S H N S N G G F K R S K Q E M E S I S T G L G S K S K P C T K F F S T S G C P F G D N C H F L
gm007036_Glyma0    M D I R K R G R H E T G - - F S L N G G F K R S K Q E M E S L S T G V G S K S K P C T K F F S T A G C P F G E G C H F L
gm004340_Glyma0    M D V R K R G R P D V - - - - N L N G A V K K T K Q E L E S L S S G V G S K S K P C T K F F S T A G C P F G E G C H F L
 
AT5G06770.1     H Y V P G G Y N A A A Q M T N L R P P V S Q V - S R N M - - - - - - - Q G S G - - - - - - - - - - - - - - - - - - - - -
gm007036_Glyma0    H Y V P G G Y N A V A H M M N L T P A A P P P P S R N V A A L P H V P N G S A P S A V K T R I C N K F N T A E G C K F G
gm004340_Glyma0    H Y V P G G Y N V V A H M M N L K P A A P P P - - R T V A A P P P I P N G S A P S A V K T R I C N K F N T A E G C K F G
 
AT5G06770.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G P - - G G R F S G R G D P G S G P V S I F G A - S T S K I S
gm007036_Glyma0    D K C H F A H G E W E L G K H I A P S F D D H H - - - A M G P P G A G R L A G R M E - P P G P A A S F G A N S T A K I S
gm004340_Glyma0    D K C H F A H G E W E L G K P I A P S I D D H H H H R P L G P P A G G R M A G R I E P P P A M A G S F G A I S T A K I S
 
AT5G06770.1     V D A S L A G A I I G K G G I H S K Q I C R E T G A K L S I K D H E R D P N L K I I E L E G T F E Q I N V A S G M V R E
gm007036_Glyma0    V E A S L A G A I I G K G G V N S K Q I C R Q T G A K L S I R E H E S D P N L R N I E L E G S F E Q I K E A S N M V K D
gm004340_Glyma0    V E A S L A G A I I G K G G V N S K Q I C R Q T G A K L S I R E H E S D P N L R N I E L E G T F E Q I K E A S N M V K D
 
AT5G06770.1     L I G R L G S V K K P Q G I G G P E G K P H P - G S N Y K T K I C D R Y S K G N C T Y G D R C H F A H G E S E L R R S G
gm007036_Glyma0    L L L T L Q M S A P P K T T P G V P G A P A S H G S N F K T K L C E N F A K G S C T F G D R C H F A H G A S E L R K S G
gm004340_Glyma0    L L L T V S M S A P P K S T P G V P G A P A P P G S N F K T K L C E N F A K G S C T F G E R C H F A H G A A E L R K S G
 
AT5G06770.1     I A
gm007036_Glyma0    V -
gm004340_Glyma0    V -
 
0